COL18A1 Chromosome 21

Collagen type XVIII alpha 1 chain
258 variants 258 Health Risk

Upload your DNA to see your personal genotypes for variants in COL18A1.

What This Gene Does
This gene encodes the alpha chain of type XVIII collagen. This collagen is one of the multiplexins, extracellular matrix proteins that contain multiple triple-helix domains (collagenous domains) interrupted by non-collagenous domains. A long isoform of the protein has an N-terminal domain that is homologous to the extracellular part of frizzled receptors. Proteolytic processing at several endogenous cleavage sites in the C-terminal domain results in production of endostatin, a potent antiangiogenic protein that is able to inhibit angiogenesis and tumor growth. Mutations in this gene are associated with Knobloch syndrome. The main features of this syndrome involve retinal abnormalities, so type XVIII collagen may play an important role in retinal structure and in neural tube closure. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]
Gene Info
Gene Group
"MicroRNA protein coding host genes|Multiplexin collagens"
Locus Type
gene with protein product
Location
21q22.3
Ensembl
ENSG00000182871
Associated Conditions (24)
COL18A1-related disorder
Progressive neurodegenerative disease
Hereditary glaucoma
primary closed-angle
Inborn genetic diseases
Knobloch syndrome
Lung cancer
Nonpapillary renal cell carcinoma
Knobloch syndrome 1
Gastric cancer
Papillary renal cell carcinoma type 1
Thyroid cancer
nonmedullary
1
Retinal dystrophy
Clear cell carcinoma of kidney
Melanoma
Cataract
High myopia
Nystagmus
+4 more conditions
Key Variants
All Variants (258)
RSID Category Clinical Significance Conditions
RS1002126692 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS1057518766 Health Risk Conflicting classifications of pathogenicity Progressive neurodegenerative disease, Hereditary glaucoma, primary closed-angle
RS1085307837 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS1085307935 Health Risk Conflicting classifications of pathogenicity
RS11544970 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS1272002645 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS139122081 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS1392844393 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS1405984023 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS145912433 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS149772252 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Inborn genetic diseases
RS151228115 Health Risk Conflicting classifications of pathogenicity Lung cancer, Lung cancer
RS1555853999 Health Risk Conflicting classifications of pathogenicity
RS181012655 Health Risk Conflicting classifications of pathogenicity
RS183924183 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS185296216 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Nonpapillary renal cell carcinoma, Inborn genetic diseases
RS191917454 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS199523495 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS199823547 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Inborn genetic diseases, Knobloch syndrome
RS199836125 Health Risk Conflicting classifications of pathogenicity
RS199910738 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS200106008 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS200143450 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS200284308 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Inborn genetic diseases, COL18A1-related disorder
RS200484625 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome 1, COL18A1-related disorder
RS200886865 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS201006742 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, Inborn genetic diseases, COL18A1-related disorder
RS201043325 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS201057172 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS201380467 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS201381498 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS201476017 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Inborn genetic diseases, COL18A1-related disorder
RS202012055 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS202106628 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS2236453 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Inborn genetic diseases, COL18A1-related disorder
RS367841049 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS368233273 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS368257475 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS368902481 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome 1, Knobloch syndrome 1
RS369084150 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS369219412 Health Risk Conflicting classifications of pathogenicity
RS369390092 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS369701764 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS369721525 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS371106773 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS371970491 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, COL18A1-related disorder, Inborn genetic diseases
RS372133935 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS373006940 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS373105258 Health Risk Conflicting classifications of pathogenicity
RS374522196 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
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