COL18A1 Chromosome 21

Collagen type XVIII alpha 1 chain
258 variants 258 Health Risk

Upload your DNA to see your personal genotypes for variants in COL18A1.

What This Gene Does
This gene encodes the alpha chain of type XVIII collagen. This collagen is one of the multiplexins, extracellular matrix proteins that contain multiple triple-helix domains (collagenous domains) interrupted by non-collagenous domains. A long isoform of the protein has an N-terminal domain that is homologous to the extracellular part of frizzled receptors. Proteolytic processing at several endogenous cleavage sites in the C-terminal domain results in production of endostatin, a potent antiangiogenic protein that is able to inhibit angiogenesis and tumor growth. Mutations in this gene are associated with Knobloch syndrome. The main features of this syndrome involve retinal abnormalities, so type XVIII collagen may play an important role in retinal structure and in neural tube closure. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]
Gene Info
Gene Group
"MicroRNA protein coding host genes|Multiplexin collagens"
Locus Type
gene with protein product
Location
21q22.3
Ensembl
ENSG00000182871
Associated Conditions (24)
COL18A1-related disorder
Progressive neurodegenerative disease
Hereditary glaucoma
primary closed-angle
Inborn genetic diseases
Knobloch syndrome
Lung cancer
Nonpapillary renal cell carcinoma
Knobloch syndrome 1
Gastric cancer
Papillary renal cell carcinoma type 1
Thyroid cancer
nonmedullary
1
Retinal dystrophy
Clear cell carcinoma of kidney
Melanoma
Cataract
High myopia
Nystagmus
+4 more conditions
Key Variants
All Variants (258)
RSID Category Clinical Significance Conditions
RS374530279 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS375087150 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome 1, Knobloch syndrome 1
RS376187378 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS376919554 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS377601838 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS377620137 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome 1, Hereditary glaucoma, primary closed-angle
RS528696974 Health Risk Conflicting classifications of pathogenicity
RS528991245 Health Risk Conflicting classifications of pathogenicity Hereditary glaucoma, primary closed-angle, Knobloch syndrome 1
RS530808102 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS549345311 Health Risk Conflicting classifications of pathogenicity
RS556113991 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS559392439 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS559725056 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Papillary renal cell carcinoma type 1
RS571597296 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS576172127 Health Risk Conflicting classifications of pathogenicity
RS578202936 Health Risk Conflicting classifications of pathogenicity
RS61735035 Health Risk Conflicting classifications of pathogenicity
RS62000960 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, COL18A1-related disorder, Inborn genetic diseases
RS749001958 Health Risk Conflicting classifications of pathogenicity
RS753363173 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Inborn genetic diseases, Knobloch syndrome
RS754075778 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome 1, COL18A1-related disorder
RS754187386 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS754575228 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS754862849 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS759338220 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS759403198 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS760342643 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome 1, Inborn genetic diseases, Knobloch syndrome 1
RS760640619 Health Risk Conflicting classifications of pathogenicity COL18A1-related disorder, COL18A1-related disorder
RS761528498 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS761673241 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS762806573 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS764710670 Health Risk Conflicting classifications of pathogenicity
RS765311365 Health Risk Conflicting classifications of pathogenicity
RS765348415 Health Risk Conflicting classifications of pathogenicity
RS765776651 Health Risk Conflicting classifications of pathogenicity
RS767090801 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome 1, Knobloch syndrome 1
RS768751253 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS770714794 Health Risk Conflicting classifications of pathogenicity
RS772102800 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS772492972 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS774784084 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS780610411 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS780751282 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS886057122 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS886057123 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, COL18A1-related disorder, Knobloch syndrome
RS886057125 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS886057126 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS886057127 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS886057128 Health Risk Conflicting classifications of pathogenicity Knobloch syndrome, Knobloch syndrome
RS1114167359 Health Risk Likely pathogenic Knobloch syndrome, Thyroid cancer, nonmedullary
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