COL18A1 Chromosome 21

Collagen type XVIII alpha 1 chain
258 variants 258 Health Risk

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What This Gene Does
This gene encodes the alpha chain of type XVIII collagen. This collagen is one of the multiplexins, extracellular matrix proteins that contain multiple triple-helix domains (collagenous domains) interrupted by non-collagenous domains. A long isoform of the protein has an N-terminal domain that is homologous to the extracellular part of frizzled receptors. Proteolytic processing at several endogenous cleavage sites in the C-terminal domain results in production of endostatin, a potent antiangiogenic protein that is able to inhibit angiogenesis and tumor growth. Mutations in this gene are associated with Knobloch syndrome. The main features of this syndrome involve retinal abnormalities, so type XVIII collagen may play an important role in retinal structure and in neural tube closure. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]
Gene Info
Gene Group
"MicroRNA protein coding host genes|Multiplexin collagens"
Locus Type
gene with protein product
Location
21q22.3
Ensembl
ENSG00000182871
Associated Conditions (24)
COL18A1-related disorder
Progressive neurodegenerative disease
Hereditary glaucoma
primary closed-angle
Inborn genetic diseases
Knobloch syndrome
Lung cancer
Nonpapillary renal cell carcinoma
Knobloch syndrome 1
Gastric cancer
Papillary renal cell carcinoma type 1
Thyroid cancer
nonmedullary
1
Retinal dystrophy
Clear cell carcinoma of kidney
Melanoma
Cataract
High myopia
Nystagmus
+4 more conditions
Key Variants
All Variants (258)
RSID Category Clinical Significance Conditions
RS922296917 Health Risk Pathogenic
RS2035718735 Health Risk Pathogenic/Likely pathogenic Hereditary glaucoma, primary closed-angle, Hereditary glaucoma
RS541908170 Health Risk Pathogenic/Likely pathogenic Knobloch syndrome 1, Knobloch syndrome 1
RS753824908 Health Risk Pathogenic/Likely pathogenic Knobloch syndrome 1, Knobloch syndrome 1
RS756223600 Health Risk Pathogenic/Likely pathogenic Retinal dystrophy, Knobloch syndrome 1, Retinal dystrophy
RS771752014 Health Risk Pathogenic/Likely pathogenic Knobloch syndrome, Knobloch syndrome
RS778909108 Health Risk Pathogenic/Likely pathogenic
RS786205554 Health Risk Pathogenic/Likely pathogenic
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