SMPD1 Chromosome 11
Sphingomyelin phosphodiesterase 1
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What This Gene Does
The protein encoded by this gene is a lysosomal acid sphingomyelinase that converts sphingomyelin to ceramide. The encoded protein also has phospholipase C activity. Defects in this gene are a cause of Niemann-Pick disease type A (NPA) and Niemann-Pick disease type B (NPB). Multiple transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2010]
Associated Conditions (19)
Niemann-Pick disease
type A
type B
Sphingomyelin/cholesterol lipidosis
Inborn genetic diseases
SMPD1-related disorder
Gaucher disease
Intellectual disability
Lysosomal storage disease
Abnormality of metabolism/homeostasis
Niemann-pick disease
intermediate
protracted neurovisceral
Acid sphingomyelinase deficiency
See cases
type C1
Ceroid lipofuscinosis
neuronal
6A
Key Variants
RS1181161932
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS1206562843
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS1228068212
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, Sphingomyelin/cholesterol lipidosis
Health Risk
RS1312090680
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS139882665
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS140202512
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS140221837
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS140269316
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS140770832
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS141387770
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS142787001
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS143612450
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
All Variants (406)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1590738910 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS1847857299 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1847863441 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS1847871015 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1847871996 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1847910379 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1847921591 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS1847921909 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1847925196 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS1847935299 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1847944988 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS1847952502 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1848015403 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1848019149 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1848042860 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1848043657 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1848061158 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS1848063769 | Health Risk | Pathogenic | — |
| RS1848086376 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS1848086912 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS1848088118 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS200763423 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2134004628 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2134006350 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2134006592 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS2134006884 | Health Risk | Pathogenic | — |
| RS2134009391 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2134009550 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS2134010245 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2134010914 | Health Risk | Pathogenic | Niemann-Pick disease, type B, Sphingomyelin/cholesterol lipidosis |
| RS2134011809 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2134012543 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS2134013121 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2134013240 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS2134013368 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2134017306 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS2134017443 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2134017711 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2134023240 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2134023663 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2493796691 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2493798730 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2493799100 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2493800050 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2493800618 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2493800963 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2493803501 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |
| RS2493805665 | Health Risk | Pathogenic | Niemann-Pick disease, type B, type A |
| RS2493806255 | Health Risk | Pathogenic | Niemann-Pick disease, type A, Niemann-Pick disease |
| RS2493806280 | Health Risk | Pathogenic | Niemann-Pick disease, type A, type B |