HSPG2 Chromosome 1

Heparan sulfate proteoglycan 2
312 variants 312 Health Risk

Upload your DNA to see your personal genotypes for variants in HSPG2.

What This Gene Does
This gene encodes the perlecan protein, which consists of a core protein to which three long chains of glycosaminoglycans (heparan sulfate or chondroitin sulfate) are attached. The perlecan protein is a large multidomain proteoglycan that binds to and cross-links many extracellular matrix components and cell-surface molecules. It has been shown that this protein interacts with laminin, prolargin, collagen type IV, FGFBP1, FBLN2, FGF7 and transthyretin, etc., and it plays essential roles in multiple biological activities. Perlecan is a key component of the vascular extracellular matrix, where it helps to maintain the endothelial barrier function. It is a potent inhibitor of smooth muscle cell proliferation and is thus thought to help maintain vascular homeostasis. It can also promote growth factor (e.g., FGF2) activity and thus stimulate endothelial growth and re-generation. It is a major component of basement membranes, where it is involved in the stabilization of other molecules as well as being involved with glomerular permeability to macromolecules and cell adhesion. Mutations in this gene cause Schwartz-Jampel syndrome type 1, Silverman-Handmaker type of dyssegmental dysplasia, and tardive dyskinesia. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014]
Gene Info
Gene Group
"Proteoglycans|I-set domain containing"
Locus Type
gene with protein product
Location
1p36.12
Ensembl
ENSG00000142798
Associated Conditions (17)
HSPG2-related disorder
Inborn genetic diseases
Schwartz-Jampel syndrome
Lethal Kniest-like syndrome
Connective tissue disorder
Multiple congenital anomalies/dysmorphic syndrome
Schwartz-Jampel syndrome type 1
Lymphoma
Intellectual disability
See cases
Cervical cancer
Ovarian serous cystadenocarcinoma
Malignant tumor of esophagus
Childhood-onset schizophrenia
Autosomal recessive HSPG2-related disorders
Malignant tumor of urinary bladder
Abnormal facial shape
Key Variants
RS1057521178
Conflicting classifications of pathogenicity
Health Risk
RS111558823
Conflicting classifications of pathogenicity
HSPG2-related disorder, HSPG2-related disorder
Health Risk
RS111846397
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS111866498
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Connective tissue disorder
Health Risk
RS113652076
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Connective tissue disorder
Health Risk
RS113695182
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS116316900
Conflicting classifications of pathogenicity
Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Inborn genetic diseases
Health Risk
RS116630187
Conflicting classifications of pathogenicity
Lethal Kniest-like syndrome, Connective tissue disorder, HSPG2-related disorder
Health Risk
RS1336552092
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Schwartz-Jampel syndrome type 1, Schwartz-Jampel syndrome
Health Risk
RS138459752
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, HSPG2-related disorder
Health Risk
RS138460117
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, HSPG2-related disorder
Health Risk
RS138518139
Conflicting classifications of pathogenicity
Health Risk
All Variants (312)
RSID Category Clinical Significance Conditions
RS145093233 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS145265774 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS145687082 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Connective tissue disorder
RS1459647807 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS1460932486 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS146167897 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS146179360 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS146309392 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS146363738 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Lethal Kniest-like syndrome
RS146462440 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome type 1
RS146505513 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS147286334 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, HSPG2-related disorder
RS147633715 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, HSPG2-related disorder, Inborn genetic diseases
RS147669915 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, HSPG2-related disorder
RS147810145 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Schwartz-Jampel syndrome type 1
RS147966644 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS148066529 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Connective tissue disorder
RS148362276 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, HSPG2-related disorder, Schwartz-Jampel syndrome
RS148592148 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS148788926 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS149094407 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome type 1
RS149159881 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, HSPG2-related disorder
RS149319607 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome type 1
RS149466423 Health Risk Conflicting classifications of pathogenicity
RS149644947 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Inborn genetic diseases
RS149710901 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, HSPG2-related disorder, Connective tissue disorder
RS150126997 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS150129885 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS150600286 Health Risk Conflicting classifications of pathogenicity
RS150666616 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Inborn genetic diseases
RS150771453 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS151039517 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS1572191112 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS1639253483 Health Risk Conflicting classifications of pathogenicity
RS187648591 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS189103460 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS189296705 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS189754659 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS189837148 Health Risk Conflicting classifications of pathogenicity
RS190391786 Health Risk Conflicting classifications of pathogenicity
RS190732238 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS199788526 Health Risk Conflicting classifications of pathogenicity
RS199942544 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS200196481 Health Risk Conflicting classifications of pathogenicity
RS200221194 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Inborn genetic diseases
RS200225298 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Cervical cancer
RS200462415 Health Risk Conflicting classifications of pathogenicity
RS200930800 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS200997062 Health Risk Conflicting classifications of pathogenicity
RS201338722 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
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