SLC4A1 Chromosome 17

Solute carrier family 4 member 1 (Diego blood group)
205 variants 204 Health Risk 1 Trait

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What This Gene Does
The protein encoded by this gene is part of the anion exchanger (AE) family and is expressed in the erythrocyte plasma membrane, where it functions as a chloride/bicarbonate exchanger involved in carbon dioxide transport from tissues to lungs. The protein comprises two domains that are structurally and functionally distinct. The N-terminal 40kDa domain is located in the cytoplasm and acts as an attachment site for the red cell skeleton by binding ankyrin. The glycosylated C-terminal membrane-associated domain contains 12-14 membrane spanning segments and carries out the stilbene disulphonate-sensitive exchange transport of anions. The cytoplasmic tail at the extreme C-terminus of the membrane domain binds carbonic anhydrase II. The encoded protein associates with the red cell membrane protein glycophorin A and this association promotes the correct folding and translocation of the exchanger. This protein is predominantly dimeric but forms tetramers in the presence of ankyrin. Many mutations in this gene are known in man, and these mutations can lead to two types of disease: destabilization of red cell membrane leading to hereditary spherocytosis, and defective kidney acid secretion leading to distal renal tubular acidosis. Other mutations that do not give rise to disease result in novel blood group antigens, which form the Diego blood group system. Southeast Asian ovalocytosis (SAO, Melanesian ovalocytosis) results from the heterozygous presence of a deletion in the encoded protein and is common in areas where Plasmodium falciparum malaria is endemic. One null mutation in this gene is known, resulting in very severe anemia and nephrocalcinosis. [provided by RefSeq, Jul 2008]
Gene Info
Gene Group
"Blood group antigens|CD molecules|Solute carrier family 4"
Locus Type
gene with protein product
Location
17q21.31
Ensembl
ENSG00000004939
Associated Conditions (24)
Hereditary spherocytosis type 4
11 conditions
Autosomal dominant distal renal tubular acidosis
SWANN BLOOD GROUP ANTIGEN
Hemolytic anemia
Acanthocytosis due to band 3 HT
Acanthocytosis
SLC4A1-related disorder
Renal tubular acidosis
distal
4
with hemolytic anemia
Inborn genetic diseases
Cryohydrocytosis
Distal renal tubular acidosis
Autosomal recessive distal renal tubular acidosis
BLOOD GROUP--WRIGHT ANTIGEN
with normal red cell morphology
BLOOD GROUP--DIEGO SYSTEM
Southeast Asian ovalocytosis
+4 more conditions
Key Variants
RS121912741
Conflicting classifications of pathogenicity
Hereditary spherocytosis type 4, Hereditary spherocytosis type 4, 11 conditions
Health Risk
RS121912749
Conflicting classifications of pathogenicity
Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, 11 conditions
Health Risk
RS121912757
Conflicting classifications of pathogenicity
SWANN BLOOD GROUP ANTIGEN, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
Health Risk
RS121912759
Conflicting classifications of pathogenicity
Acanthocytosis due to band 3 HT, Acanthocytosis, Hemolytic anemia
Health Risk
RS13306774
Conflicting classifications of pathogenicity
Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
Health Risk
RS13306776
Conflicting classifications of pathogenicity
Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
Health Risk
RS1362663440
Conflicting classifications of pathogenicity
Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
Health Risk
RS138242019
Conflicting classifications of pathogenicity
Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4, Hemolytic anemia
Health Risk
RS139308660
Conflicting classifications of pathogenicity
Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4, Hemolytic anemia
Health Risk
RS141605301
Conflicting classifications of pathogenicity
Autosomal dominant distal renal tubular acidosis, Hemolytic anemia, Hereditary spherocytosis type 4
Health Risk
RS142161945
Conflicting classifications of pathogenicity
Health Risk
RS142757938
Conflicting classifications of pathogenicity
Health Risk
All Variants (205)
RSID Category Clinical Significance Conditions
RS121912741 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hereditary spherocytosis type 4, 11 conditions
RS121912749 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, 11 conditions
RS121912757 Health Risk Conflicting classifications of pathogenicity SWANN BLOOD GROUP ANTIGEN, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
RS121912759 Health Risk Conflicting classifications of pathogenicity Acanthocytosis due to band 3 HT, Acanthocytosis, Hemolytic anemia
RS13306774 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
RS13306776 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
RS1362663440 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
RS138242019 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4, Hemolytic anemia
RS139308660 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4, Hemolytic anemia
RS141605301 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hemolytic anemia, Hereditary spherocytosis type 4
RS142161945 Health Risk Conflicting classifications of pathogenicity
RS142757938 Health Risk Conflicting classifications of pathogenicity
RS142866653 Health Risk Conflicting classifications of pathogenicity
RS142905862 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hemolytic anemia, Autosomal dominant distal renal tubular acidosis
RS143794240 Health Risk Conflicting classifications of pathogenicity 11 conditions, 11 conditions
RS145041032 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4, Hemolytic anemia
RS145054469 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, 11 conditions, Inborn genetic diseases
RS147390654 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, Renal tubular acidosis
RS147838240 Health Risk Conflicting classifications of pathogenicity Hemolytic anemia, Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis
RS148170067 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hemolytic anemia, Hereditary spherocytosis type 4
RS148317876 Health Risk Conflicting classifications of pathogenicity 11 conditions, 11 conditions
RS149362848 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, 11 conditions, Inborn genetic diseases
RS150340150 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Autosomal dominant distal renal tubular acidosis, 11 conditions
RS150913170 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS199607239 Health Risk Conflicting classifications of pathogenicity 11 conditions, 11 conditions
RS200107906 Health Risk Conflicting classifications of pathogenicity Hemolytic anemia, Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis
RS201265160 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
RS201280873 Health Risk Conflicting classifications of pathogenicity 11 conditions, Inborn genetic diseases, 11 conditions
RS201400208 Health Risk Conflicting classifications of pathogenicity 11 conditions, 11 conditions
RS201611359 Health Risk Conflicting classifications of pathogenicity 11 conditions, Inborn genetic diseases, 11 conditions
RS202243808 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
RS2047401850 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Autosomal dominant distal renal tubular acidosis
RS2047407019 Health Risk Conflicting classifications of pathogenicity Cryohydrocytosis, Cryohydrocytosis
RS2144611947 Health Risk Conflicting classifications of pathogenicity
RS2509958887 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
RS2509960984 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
RS2509962537 Health Risk Conflicting classifications of pathogenicity
RS28929480 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Cryohydrocytosis, 11 conditions
RS28931583 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hereditary spherocytosis type 4
RS368863744 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis, Hemolytic anemia
RS375136281 Health Risk Conflicting classifications of pathogenicity
RS376999476 Health Risk Conflicting classifications of pathogenicity Hemolytic anemia, Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis
RS45562031 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hemolytic anemia, Cryohydrocytosis
RS45568837 Health Risk Conflicting classifications of pathogenicity
RS5038 Health Risk Conflicting classifications of pathogenicity Hemolytic anemia, Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4
RS538778224 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hemolytic anemia, Hereditary spherocytosis type 4
RS541501285 Health Risk Conflicting classifications of pathogenicity Hemolytic anemia, Hereditary spherocytosis type 4, Autosomal dominant distal renal tubular acidosis
RS55637644 Health Risk Conflicting classifications of pathogenicity 11 conditions, 11 conditions
RS566359654 Health Risk Conflicting classifications of pathogenicity Autosomal dominant distal renal tubular acidosis, Hereditary spherocytosis type 4, Hemolytic anemia
RS571092411 Health Risk Conflicting classifications of pathogenicity Hereditary spherocytosis type 4, Hemolytic anemia, Autosomal dominant distal renal tubular acidosis
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