SLC22A5 Chromosome 5

Solute carrier family 22 member 5
301 variants 301 Health Risk

Upload your DNA to see your personal genotypes for variants in SLC22A5.

What This Gene Does
Polyspecific organic cation transporters in the liver, kidney, intestine, and other organs are critical for elimination of many endogenous small organic cations as well as a wide array of drugs and environmental toxins. The encoded protein is a plasma integral membrane protein which functions both as an organic cation transporter and as a sodium-dependent high affinity carnitine transporter. The encoded protein is involved in the active cellular uptake of carnitine. Mutations in this gene are the cause of systemic primary carnitine deficiency (CDSP), an autosomal recessive disorder manifested early in life by hypoketotic hypoglycemia and acute metabolic decompensation, and later in life by skeletal myopathy or cardiomyopathy. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Apr 2015]
Gene Info
Gene Group
Solute carrier family 22
Locus Type
gene with protein product
Location
5q31.1
Ensembl
ENSG00000197375
Associated Conditions (19)
Renal carnitine transport defect
SLC22A5-related disorder
See cases
Acute rhabdomyolysis
Nonpapillary renal cell carcinoma
Decreased circulating carnitine concentration
Inborn genetic diseases
Abnormality of the nervous system
High myopia
Colorectal cancer
Ovarian serous cystadenocarcinoma
Colon adenocarcinoma
Gastric cancer
Familial cancer of breast
Malignant tumor of urinary bladder
Carnitine deficiency
Dilated cardiomyopathy 1A
Congenital myasthenic syndrome 20
Papillary renal cell carcinoma type 1
Key Variants
RS1045644394
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS11568513
Conflicting classifications of pathogenicity
Renal carnitine transport defect, SLC22A5-related disorder, Renal carnitine transport defect
Health Risk
RS11568514
Conflicting classifications of pathogenicity
Renal carnitine transport defect, See cases, Acute rhabdomyolysis
Health Risk
RS1169005119
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1180267143
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1183338050
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1189776349
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS121908893
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect, Nonpapillary renal cell carcinoma
Health Risk
RS1319889867
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1321621475
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Decreased circulating carnitine concentration, Inborn genetic diseases
Health Risk
RS1335556134
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
Health Risk
RS1385634398
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
All Variants (301)
RSID Category Clinical Significance Conditions
RS1045644394 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS11568513 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, SLC22A5-related disorder, Renal carnitine transport defect
RS11568514 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, See cases, Acute rhabdomyolysis
RS1169005119 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS1180267143 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS1183338050 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS1189776349 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS121908893 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect, Nonpapillary renal cell carcinoma
RS1319889867 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect, Renal carnitine transport defect
RS1321621475 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Inborn genetic diseases
RS1335556134 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS1385634398 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS142264458 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS142447950 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS1437174685 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS144020613 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS144054688 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, SLC22A5-related disorder, Renal carnitine transport defect
RS145068530 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS145350949 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Inborn genetic diseases, Renal carnitine transport defect
RS145792427 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, SLC22A5-related disorder, Renal carnitine transport defect
RS146185976 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS1476076948 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS149201271 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS149521997 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, SLC22A5-related disorder, Renal carnitine transport defect
RS149730454 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS150457229 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS150544263 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS150705788 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS150775371 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS151231558 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS1752784868 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS188698686 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS199689597 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS200125400 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Inborn genetic diseases, Renal carnitine transport defect
RS200290813 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS200637508 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS200699819 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS201082652 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Abnormality of the nervous system, Renal carnitine transport defect
RS2126775629 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS2126786122 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS28383480 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, High myopia, SLC22A5-related disorder
RS28383481 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS369724970 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS373018486 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS377734902 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS377767445 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS377767450 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS386134193 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, SLC22A5-related disorder, Malignant tumor of urinary bladder
RS386134194 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
RS386134197 Health Risk Conflicting classifications of pathogenicity Renal carnitine transport defect, Renal carnitine transport defect
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