LDB3 Chromosome 10
LIM domain binding 3
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What This Gene Does
This gene encodes a PDZ domain-containing protein. PDZ motifs are modular protein-protein interaction domains consisting of 80-120 amino acid residues. PDZ domain-containing proteins interact with each other in cytoskeletal assembly or with other proteins involved in targeting and clustering of membrane proteins. The protein encoded by this gene interacts with alpha-actinin-2 through its N-terminal PDZ domain and with protein kinase C via its C-terminal LIM domains. The LIM domain is a cysteine-rich motif defined by 50-60 amino acids containing two zinc-binding modules. This protein also interacts with all three members of the myozenin family. Mutations in this gene have been associated with myofibrillar myopathy and dilated cardiomyopathy. Alternatively spliced transcript variants encoding different isoforms have been identified; all isoforms have N-terminal PDZ domains while only longer isoforms (1, 2 and 5) have C-terminal LIM domains. [provided by RefSeq, Jan 2010]
Gene Info
Gene Group
"LIM domain containing|PDZ domain containing"
Locus Type
gene with protein product
Location
10q23.2
Ensembl
ENSG00000122367
Associated Conditions (18)
Myofibrillar myopathy 4
Dilated cardiomyopathy 1C
Cardiovascular phenotype
Primary familial dilated cardiomyopathy
Cardiomyopathy
Primary dilated cardiomyopathy
LDB3-related disorder
Primary familial hypertrophic cardiomyopathy
Hypertrophic cardiomyopathy
Dilated cardiomyopathy 1A
Familial isolated dilated cardiomyopathy
dilated
2l
Arrhythmogenic right ventricular cardiomyopathy
Left ventricular noncompaction 3
Familial hypertrophic cardiomyopathy 24
Neuromuscular disease
Myofibrillar myopathy
Key Variants
RS1004518756
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Myofibrillar myopathy 4
Health Risk
RS1004651681
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4
Health Risk
RS1026187830
Conflicting classifications of pathogenicity
Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype
Health Risk
RS1028583921
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Myofibrillar myopathy 4
Health Risk
RS1030546921
Conflicting classifications of pathogenicity
Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype
Health Risk
RS1057520727
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Myofibrillar myopathy 4
Health Risk
RS1057521576
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Myofibrillar myopathy 4
Health Risk
RS1060501316
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Cardiovascular phenotype
Health Risk
RS111941389
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4
Health Risk
RS113817827
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4
Health Risk
RS1217545964
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4
Health Risk
RS121908335
Conflicting classifications of pathogenicity
Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Cardiovascular phenotype
Health Risk
All Variants (155)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1004518756 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Myofibrillar myopathy 4 |
| RS1004651681 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1026187830 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS1028583921 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Myofibrillar myopathy 4 |
| RS1030546921 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS1057520727 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Myofibrillar myopathy 4 |
| RS1057521576 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Myofibrillar myopathy 4 |
| RS1060501316 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Cardiovascular phenotype |
| RS111941389 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS113817827 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1217545964 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS121908335 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Cardiovascular phenotype |
| RS121908338 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1C, Primary dilated cardiomyopathy, Myofibrillar myopathy 4 |
| RS1219221888 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1279807211 | Health Risk | Conflicting classifications of pathogenicity | LDB3-related disorder, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS1285270306 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Dilated cardiomyopathy 1C |
| RS1329610577 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1354084230 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Dilated cardiomyopathy 1C |
| RS138251566 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Cardiomyopathy, Hypertrophic cardiomyopathy |
| RS138951890 | Health Risk | Conflicting classifications of pathogenicity | Primary familial dilated cardiomyopathy, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS139104492 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1A, Dilated cardiomyopathy 1C |
| RS139922045 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Dilated cardiomyopathy 1C, Myofibrillar myopathy 4 |
| RS141078955 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1413752114 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS141430674 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS141569007 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS1431153587 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS143311349 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS143764931 | Health Risk | Conflicting classifications of pathogenicity | Cardiomyopathy, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS143823978 | Health Risk | Conflicting classifications of pathogenicity | Cardiomyopathy, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS144445130 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS145402041 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Cardiovascular phenotype |
| RS147072071 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Primary familial hypertrophic cardiomyopathy, Cardiovascular phenotype |
| RS149348427 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Primary familial dilated cardiomyopathy |
| RS151166414 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1554864768 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Myofibrillar myopathy 4 |
| RS1589676711 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Myofibrillar myopathy 4 |
| RS1845145732 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1846880706 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Myofibrillar myopathy 4 |
| RS1846888303 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Dilated cardiomyopathy 1C, Cardiovascular phenotype |
| RS1846890164 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS1846942056 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Myofibrillar myopathy 4 |
| RS192983732 | Health Risk | Conflicting classifications of pathogenicity | Cardiovascular phenotype, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS200239096 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiomyopathy, Cardiovascular phenotype |
| RS200458194 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Myofibrillar myopathy 4 |
| RS200580597 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1C, Myofibrillar myopathy 4, Cardiovascular phenotype |
| RS200796750 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Hypertrophic cardiomyopathy, Cardiovascular phenotype |
| RS201417512 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiovascular phenotype, Dilated cardiomyopathy 1C |
| RS201715521 | Health Risk | Conflicting classifications of pathogenicity | Myofibrillar myopathy 4, Cardiomyopathy, Cardiovascular phenotype |
| RS201865389 | Health Risk | Conflicting classifications of pathogenicity | — |