HSPG2 Chromosome 1

Heparan sulfate proteoglycan 2
312 variants 312 Health Risk

Upload your DNA to see your personal genotypes for variants in HSPG2.

What This Gene Does
This gene encodes the perlecan protein, which consists of a core protein to which three long chains of glycosaminoglycans (heparan sulfate or chondroitin sulfate) are attached. The perlecan protein is a large multidomain proteoglycan that binds to and cross-links many extracellular matrix components and cell-surface molecules. It has been shown that this protein interacts with laminin, prolargin, collagen type IV, FGFBP1, FBLN2, FGF7 and transthyretin, etc., and it plays essential roles in multiple biological activities. Perlecan is a key component of the vascular extracellular matrix, where it helps to maintain the endothelial barrier function. It is a potent inhibitor of smooth muscle cell proliferation and is thus thought to help maintain vascular homeostasis. It can also promote growth factor (e.g., FGF2) activity and thus stimulate endothelial growth and re-generation. It is a major component of basement membranes, where it is involved in the stabilization of other molecules as well as being involved with glomerular permeability to macromolecules and cell adhesion. Mutations in this gene cause Schwartz-Jampel syndrome type 1, Silverman-Handmaker type of dyssegmental dysplasia, and tardive dyskinesia. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014]
Gene Info
Gene Group
"Proteoglycans|I-set domain containing"
Locus Type
gene with protein product
Location
1p36.12
Ensembl
ENSG00000142798
Associated Conditions (17)
HSPG2-related disorder
Inborn genetic diseases
Schwartz-Jampel syndrome
Lethal Kniest-like syndrome
Connective tissue disorder
Multiple congenital anomalies/dysmorphic syndrome
Schwartz-Jampel syndrome type 1
Lymphoma
Intellectual disability
See cases
Cervical cancer
Ovarian serous cystadenocarcinoma
Malignant tumor of esophagus
Childhood-onset schizophrenia
Autosomal recessive HSPG2-related disorders
Malignant tumor of urinary bladder
Abnormal facial shape
Key Variants
RS1057521178
Conflicting classifications of pathogenicity
Health Risk
RS111558823
Conflicting classifications of pathogenicity
HSPG2-related disorder, HSPG2-related disorder
Health Risk
RS111846397
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS111866498
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Connective tissue disorder
Health Risk
RS113652076
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Connective tissue disorder
Health Risk
RS113695182
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS116316900
Conflicting classifications of pathogenicity
Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Inborn genetic diseases
Health Risk
RS116630187
Conflicting classifications of pathogenicity
Lethal Kniest-like syndrome, Connective tissue disorder, HSPG2-related disorder
Health Risk
RS1336552092
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Schwartz-Jampel syndrome type 1, Schwartz-Jampel syndrome
Health Risk
RS138459752
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, HSPG2-related disorder
Health Risk
RS138460117
Conflicting classifications of pathogenicity
Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, HSPG2-related disorder
Health Risk
RS138518139
Conflicting classifications of pathogenicity
Health Risk
All Variants (312)
RSID Category Clinical Significance Conditions
RS201491948 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome type 1, Lethal Kniest-like syndrome
RS201508804 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS202018841 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Inborn genetic diseases
RS202067055 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, HSPG2-related disorder
RS2229483 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome type 1, Schwartz-Jampel syndrome type 1
RS2229487 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Ovarian serous cystadenocarcinoma
RS2229490 Health Risk Conflicting classifications of pathogenicity
RS367617288 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS368047383 Health Risk Conflicting classifications of pathogenicity
RS368204073 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS368431013 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS368807853 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS368983547 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS369278427 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS369313904 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome type 1, Lethal Kniest-like syndrome, Inborn genetic diseases
RS369434104 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS369731617 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS369899077 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, HSPG2-related disorder
RS369970075 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS370407461 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS370558075 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS370899852 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS371076634 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Schwartz-Jampel syndrome
RS371371189 Health Risk Conflicting classifications of pathogenicity
RS371384177 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS371519713 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Connective tissue disorder
RS372318754 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Connective tissue disorder
RS372321167 Health Risk Conflicting classifications of pathogenicity
RS372508479 Health Risk Conflicting classifications of pathogenicity HSPG2-related disorder, HSPG2-related disorder
RS372633230 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS372760688 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Inborn genetic diseases
RS373818366 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS374680668 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS375006314 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Connective tissue disorder
RS375029322 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS375035794 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS375290305 Health Risk Conflicting classifications of pathogenicity
RS376190109 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Inborn genetic diseases
RS376645617 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Connective tissue disorder
RS376748881 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS376929779 Health Risk Conflicting classifications of pathogenicity
RS377063208 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS377366418 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS377601366 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome, Lethal Kniest-like syndrome, Lethal Kniest-like syndrome
RS377609659 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS527416373 Health Risk Conflicting classifications of pathogenicity Schwartz-Jampel syndrome type 1, Schwartz-Jampel syndrome type 1
RS529027225 Health Risk Conflicting classifications of pathogenicity Lethal Kniest-like syndrome, Schwartz-Jampel syndrome, Lethal Kniest-like syndrome
RS534949106 Health Risk Conflicting classifications of pathogenicity
RS535956121 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS536882233 Health Risk Conflicting classifications of pathogenicity HSPG2-related disorder, HSPG2-related disorder
Sign Up to Analyze Your DNA Log In