CST3 Chromosome 20
Cystatin C
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What This Gene Does
The cystatin superfamily encompasses proteins that contain multiple cystatin-like sequences. Some of the members are active cysteine protease inhibitors, while others have lost or perhaps never acquired this inhibitory activity. There are three inhibitory families in the superfamily, including the type 1 cystatins (stefins), type 2 cystatins and the kininogens. The type 2 cystatin proteins are a class of cysteine proteinase inhibitors found in a variety of human fluids and secretions, where they appear to provide protective functions. The cystatin locus on chromosome 20 contains the majority of the type 2 cystatin genes and pseudogenes. This gene is located in the cystatin locus and encodes the most abundant extracellular inhibitor of cysteine proteases, which is found in high concentrations in biological fluids and is expressed in virtually all organs of the body. A mutation in this gene has been associated with amyloid angiopathy. Expression of this protein in vascular wall smooth muscle cells is severely reduced in both atherosclerotic and aneurysmal aortic lesions, establishing its role in vascular disease. In addition, this protein has been shown to have an antimicrobial function, inhibiting the replication of herpes simplex virus. Alternative splicing results in multiple transcript variants encoding a single protein. [provided by RefSeq, Nov 2014]
Gene Info
Gene Group
Cystatins, type 2
Locus Type
gene with protein product
Location
20p11.21
Ensembl
ENSG00000101439
Associated Conditions (7)
CST3-related Leukodystrophy
Hereditary cerebral amyloid angiopathy
Icelandic type
Leukodystrophy
adult-onset
autosomal dominant
without amyloid angiopathy
Key Variants
RS1600363764
Conflicting classifications of pathogenicity
CST3-related Leukodystrophy, Hereditary cerebral amyloid angiopathy, Icelandic type
Health Risk
RS2515343230
Conflicting classifications of pathogenicity
Hereditary cerebral amyloid angiopathy, Icelandic type, Hereditary cerebral amyloid angiopathy
Health Risk
RS28939068
Pathogenic
Hereditary cerebral amyloid angiopathy, Icelandic type, Hereditary cerebral amyloid angiopathy
Health Risk
All Variants (3)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1600363764 | Health Risk | Conflicting classifications of pathogenicity | CST3-related Leukodystrophy, Hereditary cerebral amyloid angiopathy, Icelandic type |
| RS2515343230 | Health Risk | Conflicting classifications of pathogenicity | Hereditary cerebral amyloid angiopathy, Icelandic type, Hereditary cerebral amyloid angiopathy |
| RS28939068 | Health Risk | Pathogenic | Hereditary cerebral amyloid angiopathy, Icelandic type, Hereditary cerebral amyloid angiopathy |