SNRNP200 Chromosome 2
Small nuclear ribonucleoprotein U5 subunit 200
Upload your DNA to see your personal genotypes for variants in SNRNP200.
What This Gene Does
Pre-mRNA splicing is catalyzed by the spliceosome, a complex of specialized RNA and protein subunits that removes introns from a transcribed pre-mRNA segment. The spliceosome consists of small nuclear RNA proteins (snRNPs) U1, U2, U4, U5 and U6, together with approximately 80 conserved proteins. U5 snRNP contains nine specific proteins. This gene encodes one of the U5 snRNP-specific proteins. This protein belongs to the DEXH-box family of putative RNA helicases. It is a core component of U4/U6-U5 snRNPs and appears to catalyze an ATP-dependent unwinding of U4/U6 RNA duplices. Mutations in this gene cause autosomal-dominant retinitis pigmentosa. Alternatively spliced transcript variants encoding different isoforms have been found, but the full-length nature of these variants has not been determined. [provided by RefSeq, Mar 2010]
Gene Info
Gene Group
"U5 small nuclear ribonucleoprotein|Spliceosomal Bact complex|Spliceosomal C complex|Spliceosomal P complex"
Locus Type
gene with protein product
Location
2q11.2
Ensembl
ENSG00000144028
Associated Conditions (9)
Retinitis pigmentosa
Inborn genetic diseases
SNRNP200-related disorder
Retinal dystrophy
Retinitis pigmentosa 33
SNRNP200-related retinal disorder
Cervical cancer
Autosomal dominant retinitis pigmentosa
Retinal disorder
Key Variants
RS1004264460
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
RS1057519143
Conflicting classifications of pathogenicity
Health Risk
RS1295558388
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
RS1377252379
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS138291954
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
RS138992215
Conflicting classifications of pathogenicity
SNRNP200-related disorder, SNRNP200-related disorder
Health Risk
RS139137932
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
RS139286118
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS140087655
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
RS140629902
Conflicting classifications of pathogenicity
Retinitis pigmentosa, SNRNP200-related disorder, Retinitis pigmentosa
Health Risk
RS140702204
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
RS142585893
Conflicting classifications of pathogenicity
Retinitis pigmentosa, Retinitis pigmentosa
Health Risk
All Variants (95)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS746654808 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS747476940 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS750593383 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS754858849 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS756195450 | Health Risk | Conflicting classifications of pathogenicity | SNRNP200-related disorder, SNRNP200-related disorder |
| RS756239767 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Cervical cancer, Retinitis pigmentosa |
| RS757783750 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS758645617 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS761336347 | Health Risk | Conflicting classifications of pathogenicity | Retinal dystrophy, Retinal dystrophy |
| RS761734438 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS762289712 | Health Risk | Conflicting classifications of pathogenicity | Retinal dystrophy, Inborn genetic diseases, Retinal dystrophy |
| RS762545526 | Health Risk | Conflicting classifications of pathogenicity | Retinal dystrophy, Retinal dystrophy |
| RS764544440 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS766856664 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS767349827 | Health Risk | Conflicting classifications of pathogenicity | Retinal dystrophy, Retinal dystrophy |
| RS768075127 | Health Risk | Conflicting classifications of pathogenicity | Retinal dystrophy, Retinal dystrophy |
| RS771467567 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS773661118 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS774935614 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS775329368 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS777813072 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS779054512 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS779888644 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS786205529 | Health Risk | Conflicting classifications of pathogenicity | Autosomal dominant retinitis pigmentosa, Retinal dystrophy, Retinitis pigmentosa 33 |
| RS78715863 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Inborn genetic diseases, Retinitis pigmentosa |
| RS866936431 | Health Risk | Conflicting classifications of pathogenicity | Retinal dystrophy, Retinal dystrophy |
| RS886056457 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinal dystrophy, Retinitis pigmentosa |
| RS886056461 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS886056468 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS933842186 | Health Risk | Conflicting classifications of pathogenicity | Retinitis pigmentosa, Retinitis pigmentosa |
| RS1470798497 | Health Risk | Likely pathogenic | Retinitis pigmentosa 33, Retinitis pigmentosa 33 |
| RS149616320 | Health Risk | Likely pathogenic | Retinal dystrophy, Retinal dystrophy |
| RS2063918440 | Health Risk | Likely pathogenic | Retinal dystrophy, Retinal dystrophy |
| RS2104355428 | Health Risk | Likely pathogenic | Retinitis pigmentosa, Retinitis pigmentosa |
| RS2467315273 | Health Risk | Likely pathogenic | Retinal dystrophy, Retinal dystrophy |
| RS2467349956 | Health Risk | Likely pathogenic | Retinal dystrophy, Retinal dystrophy |
| RS527236113 | Health Risk | Likely pathogenic | Retinitis pigmentosa, Retinal dystrophy, Retinitis pigmentosa 33 |
| RS2104356633 | Health Risk | Pathogenic | — |
| RS267607077 | Health Risk | Pathogenic | Retinitis pigmentosa 33, Retinitis pigmentosa, Retinal dystrophy |
| RS397514575 | Health Risk | Pathogenic | Retinitis pigmentosa 33, Retinitis pigmentosa 33 |
| RS527236114 | Health Risk | Pathogenic | Retinitis pigmentosa, Retinitis pigmentosa |
| RS2063883437 | Health Risk | Pathogenic/Likely pathogenic | Retinitis pigmentosa 33, Retinal dystrophy, Retinal disorder |
| RS2063893838 | Health Risk | Pathogenic/Likely pathogenic | Retinal dystrophy, Retinal dystrophy |
| RS556400279 | Health Risk | Pathogenic/Likely pathogenic | Retinal dystrophy, Retinal dystrophy |
| RS959069360 | Health Risk | Pathogenic/Likely pathogenic | Retinitis pigmentosa, Retinitis pigmentosa 33, Retinal dystrophy |