SMPD1 Chromosome 11
Sphingomyelin phosphodiesterase 1
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What This Gene Does
The protein encoded by this gene is a lysosomal acid sphingomyelinase that converts sphingomyelin to ceramide. The encoded protein also has phospholipase C activity. Defects in this gene are a cause of Niemann-Pick disease type A (NPA) and Niemann-Pick disease type B (NPB). Multiple transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2010]
Associated Conditions (19)
Niemann-Pick disease
type A
type B
Sphingomyelin/cholesterol lipidosis
Inborn genetic diseases
SMPD1-related disorder
Gaucher disease
Intellectual disability
Lysosomal storage disease
Abnormality of metabolism/homeostasis
Niemann-pick disease
intermediate
protracted neurovisceral
Acid sphingomyelinase deficiency
See cases
type C1
Ceroid lipofuscinosis
neuronal
6A
Key Variants
RS1181161932
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS1206562843
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS1228068212
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, Sphingomyelin/cholesterol lipidosis
Health Risk
RS1312090680
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS139882665
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS140202512
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS140221837
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS140269316
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS140770832
Conflicting classifications of pathogenicity
Niemann-Pick disease, type B, type A
Health Risk
RS141387770
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS142787001
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
RS143612450
Conflicting classifications of pathogenicity
Niemann-Pick disease, type A, type B
Health Risk
All Variants (406)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1181161932 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS1206562843 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1228068212 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, Sphingomyelin/cholesterol lipidosis |
| RS1312090680 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS139882665 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS140202512 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS140221837 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS140269316 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS140770832 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS141387770 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS142787001 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS143612450 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS143939609 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS144428799 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, Inborn genetic diseases |
| RS144465428 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1446986999 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS144873307 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS1464825418 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS146630228 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS147258619 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS148067213 | Health Risk | Conflicting classifications of pathogenicity | Sphingomyelin/cholesterol lipidosis, Niemann-Pick disease, type B |
| RS148370501 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS148944108 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS149476159 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, Sphingomyelin/cholesterol lipidosis |
| RS149770879 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS149939736 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1554933800 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1554933929 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1564928040 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS1590747902 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1803161 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1847925080 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS1847932355 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1847934777 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1847940504 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS1848061944 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS1848079553 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS199836262 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS200443318 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS200652683 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS200763765 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS201134693 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS201367689 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS201647015 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS201659696 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS202032347 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type B, type A |
| RS202081954 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS202206564 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS202244080 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |
| RS2134024060 | Health Risk | Conflicting classifications of pathogenicity | Niemann-Pick disease, type A, type B |