SLC5A7 Chromosome 2

Solute carrier family 5 member 7
30 variants 30 Health Risk

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What This Gene Does
This gene encodes a sodium ion- and chloride ion-dependent high-affinity transporter that mediates choline uptake for acetylcholine synthesis in cholinergic neurons. The protein transports choline from the extracellular space into presynaptic terminals for synthesis into acetylcholine. Increased choline uptake results from increased density of this protein in synaptosomal plasma membranes in response to depolarization of cholinergic terminals. Dysfunction of cholinergic signaling has been implicated in various disorders including depression, attention-deficit disorder, and schizophrenia. An allelic variant of this gene is associated with autosomal dominant distal hereditary motor neuronopathy type VIIA. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2015]
Gene Info
Gene Group
Solute carrier family 5
Locus Type
gene with protein product
Location
2q12.3
Ensembl
ENSG00000115665
Associated Conditions (9)
Neuronopathy
distal hereditary motor
type 7A
Congenital myasthenic syndrome 20
Inborn genetic diseases
SLC5A7-related disorder
Charcot-Marie-Tooth disease
Distal spinal muscular atrophy
Charcot-Marie-Tooth disease type 2
Key Variants
All Variants (30)
RSID Category Clinical Significance Conditions
RS1191969326 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS1287734210 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS138945146 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS143876748 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS148535388 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS1558872822 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Neuronopathy, distal hereditary motor
RS1558872865 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS1677321281 Health Risk Conflicting classifications of pathogenicity Congenital myasthenic syndrome 20, Neuronopathy, distal hereditary motor
RS199693962 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS199864231 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS200286711 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS532174786 Health Risk Conflicting classifications of pathogenicity Congenital myasthenic syndrome 20, Neuronopathy, distal hereditary motor
RS75427357 Health Risk Conflicting classifications of pathogenicity Neuronopathy, distal hereditary motor, type 7A
RS759833850 Health Risk Conflicting classifications of pathogenicity Congenital myasthenic syndrome 20, Neuronopathy, distal hereditary motor
RS773393717 Health Risk Conflicting classifications of pathogenicity Distal spinal muscular atrophy, Neuronopathy, distal hereditary motor
RS961639912 Health Risk Conflicting classifications of pathogenicity Congenital myasthenic syndrome 20, Neuronopathy, distal hereditary motor
RS147656110 Health Risk Likely pathogenic Congenital myasthenic syndrome 20, Neuronopathy, distal hereditary motor
RS1677478183 Health Risk Likely pathogenic Neuronopathy, distal hereditary motor, type 7A
RS1678115852 Health Risk Likely pathogenic Neuronopathy, distal hereditary motor, type 7A
RS1678270963 Health Risk Likely pathogenic
RS2104340311 Health Risk Likely pathogenic Neuronopathy, distal hereditary motor, type 7A
RS2104379614 Health Risk Likely pathogenic Charcot-Marie-Tooth disease type 2, Charcot-Marie-Tooth disease type 2
RS2467051596 Health Risk Likely pathogenic Congenital myasthenic syndrome 20, Congenital myasthenic syndrome 20
RS2467117257 Health Risk Likely pathogenic Neuronopathy, distal hereditary motor, type 7A
RS2467132050 Health Risk Likely pathogenic Congenital myasthenic syndrome 20, Congenital myasthenic syndrome 20
RS2467132951 Health Risk Likely pathogenic Congenital myasthenic syndrome 20, Congenital myasthenic syndrome 20
RS2467133875 Health Risk Likely pathogenic Neuronopathy, distal hereditary motor, type 7A
RS886039767 Health Risk Likely pathogenic Congenital myasthenic syndrome 20, Congenital myasthenic syndrome 20
RS2104342591 Health Risk Pathogenic Neuronopathy, distal hereditary motor, type 7A
RS886039768 Health Risk Pathogenic Congenital myasthenic syndrome 20, Congenital myasthenic syndrome 20
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