SLC46A1 Chromosome 17

Solute carrier family 46 member 1
35 variants 35 Health Risk

Upload your DNA to see your personal genotypes for variants in SLC46A1.

What This Gene Does
This gene encodes a transmembrane proton-coupled folate transporter protein that facilitates the movement of folate and antifolate substrates across cell membranes, optimally in acidic pH environments. This protein is also expressed in the brain and choroid plexus where it transports folates into the central nervous system. This protein further functions as a heme transporter in duodenal enterocytes, and potentially in other tissues like liver and kidney. Its localization to the apical membrane or cytoplasm of intestinal cells is modulated by dietary iron levels. Mutations in this gene are associated with autosomal recessive hereditary folate malabsorption disease. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2013]
Gene Info
Gene Group
Solute carrier family 46
Locus Type
gene with protein product
Location
17q11.2
Ensembl
ENSG00000076351
Associated Conditions (4)
Congenital defect of folate absorption
SLC46A1-related disorder
Intellectual disability
Inborn genetic diseases
Key Variants
RS141992236
Conflicting classifications of pathogenicity
Health Risk
RS188529539
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, SLC46A1-related disorder, Congenital defect of folate absorption
Health Risk
RS189103810
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
RS201837257
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Intellectual disability, Inborn genetic diseases
Health Risk
RS2068243273
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
RS281875208
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
RS281875211
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
RS41297065
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, SLC46A1-related disorder, Inborn genetic diseases
Health Risk
RS41297067
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
RS41297069
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, SLC46A1-related disorder, Inborn genetic diseases
Health Risk
RS41297071
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
RS541069777
Conflicting classifications of pathogenicity
Congenital defect of folate absorption, Congenital defect of folate absorption
Health Risk
All Variants (35)
RSID Category Clinical Significance Conditions
RS141992236 Health Risk Conflicting classifications of pathogenicity
RS188529539 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, SLC46A1-related disorder, Congenital defect of folate absorption
RS189103810 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS201837257 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Intellectual disability, Inborn genetic diseases
RS2068243273 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS281875208 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS281875211 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS41297065 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, SLC46A1-related disorder, Inborn genetic diseases
RS41297067 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS41297069 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, SLC46A1-related disorder, Inborn genetic diseases
RS41297071 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS541069777 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS551213215 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS782306668 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS782480845 Health Risk Conflicting classifications of pathogenicity Congenital defect of folate absorption, Congenital defect of folate absorption
RS2142454403 Health Risk Likely pathogenic
RS2508305134 Health Risk Likely pathogenic
RS2508308450 Health Risk Likely pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS80338774 Health Risk Likely pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS1263347824 Health Risk Pathogenic
RS2142465494 Health Risk Pathogenic
RS2142467231 Health Risk Pathogenic
RS2508263280 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS2508288834 Health Risk Pathogenic
RS281875209 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS397515391 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS397515574 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS782656090 Health Risk Pathogenic
RS80338769 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS80338770 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption, Congenital defect of folate absorption
RS80338772 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS80338773 Health Risk Pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
RS80338775 Health Risk Pathogenic Congenital defect of folate absorption, Inborn genetic diseases, SLC46A1-related disorder
RS869040219 Health Risk Pathogenic
RS1597834560 Health Risk Pathogenic/Likely pathogenic Congenital defect of folate absorption, Congenital defect of folate absorption
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