SLC22A5 Chromosome 5

Solute carrier family 22 member 5
301 variants 301 Health Risk

Upload your DNA to see your personal genotypes for variants in SLC22A5.

What This Gene Does
Polyspecific organic cation transporters in the liver, kidney, intestine, and other organs are critical for elimination of many endogenous small organic cations as well as a wide array of drugs and environmental toxins. The encoded protein is a plasma integral membrane protein which functions both as an organic cation transporter and as a sodium-dependent high affinity carnitine transporter. The encoded protein is involved in the active cellular uptake of carnitine. Mutations in this gene are the cause of systemic primary carnitine deficiency (CDSP), an autosomal recessive disorder manifested early in life by hypoketotic hypoglycemia and acute metabolic decompensation, and later in life by skeletal myopathy or cardiomyopathy. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Apr 2015]
Gene Info
Gene Group
Solute carrier family 22
Locus Type
gene with protein product
Location
5q31.1
Ensembl
ENSG00000197375
Associated Conditions (19)
Renal carnitine transport defect
SLC22A5-related disorder
See cases
Acute rhabdomyolysis
Nonpapillary renal cell carcinoma
Decreased circulating carnitine concentration
Inborn genetic diseases
Abnormality of the nervous system
High myopia
Colorectal cancer
Ovarian serous cystadenocarcinoma
Colon adenocarcinoma
Gastric cancer
Familial cancer of breast
Malignant tumor of urinary bladder
Carnitine deficiency
Dilated cardiomyopathy 1A
Congenital myasthenic syndrome 20
Papillary renal cell carcinoma type 1
Key Variants
RS1045644394
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS11568513
Conflicting classifications of pathogenicity
Renal carnitine transport defect, SLC22A5-related disorder, Renal carnitine transport defect
Health Risk
RS11568514
Conflicting classifications of pathogenicity
Renal carnitine transport defect, See cases, Acute rhabdomyolysis
Health Risk
RS1169005119
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1180267143
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1183338050
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1189776349
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS121908893
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect, Nonpapillary renal cell carcinoma
Health Risk
RS1319889867
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
RS1321621475
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Decreased circulating carnitine concentration, Inborn genetic diseases
Health Risk
RS1335556134
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
Health Risk
RS1385634398
Conflicting classifications of pathogenicity
Renal carnitine transport defect, Renal carnitine transport defect
Health Risk
All Variants (301)
RSID Category Clinical Significance Conditions
RS766398620 Health Risk Likely pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS773693788 Health Risk Likely pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS796052033 Health Risk Likely pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS878853249 Health Risk Likely pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1047810495 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1057518297 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1057519051 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS11568520 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1165725533 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1194929977 Health Risk Pathogenic Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS121908887 Health Risk Pathogenic Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS121908889 Health Risk Pathogenic Renal carnitine transport defect, Ovarian serous cystadenocarcinoma, Renal carnitine transport defect
RS121908891 Health Risk Pathogenic Renal carnitine transport defect, Decreased circulating carnitine concentration, Renal carnitine transport defect
RS1554085885 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect, Renal carnitine transport defect
RS1554085942 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1554086010 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1554087461 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1554087491 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1554087719 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1554088165 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1554088578 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1751843672 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1752447161 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1752665099 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1752666026 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS1752740319 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126764814 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126764868 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126765527 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126775665 Health Risk Pathogenic
RS2126775742 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126775809 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126775820 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126782321 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126783993 Health Risk Pathogenic Renal carnitine transport defect, Carnitine deficiency, Renal carnitine transport defect
RS2126785892 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126786005 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126791314 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2126791445 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532025300 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532087760 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532088290 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532088340 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532088875 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532089562 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532089906 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532106510 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532106632 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532106666 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
RS2532117208 Health Risk Pathogenic Renal carnitine transport defect, Renal carnitine transport defect
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