SLC19A3 Chromosome 2

Solute carrier family 19 member 3
101 variants 101 Health Risk

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What This Gene Does
This gene encodes a ubiquitously expressed transmembrane thiamine transporter that lacks folate transport activity. Mutations in this gene cause biotin-responsive basal ganglia disease (BBGD); a recessive disorder manifested in childhood that progresses to chronic encephalopathy, dystonia, quadriparesis, and death if untreated. Patients with BBGD have bilateral necrosis in the head of the caudate nucleus and in the putamen. Administration of high doses of biotin in the early progression of the disorder eliminates pathological symptoms while delayed treatment results in residual paraparesis, mild cognitive disability, or dystonia. Administration of thiamine is ineffective in the treatment of this disorder. Experiments have failed to show that this protein can transport biotin. Mutations in this gene also cause a Wernicke's-like encephalopathy.[provided by RefSeq, Jan 2010]
Gene Info
Gene Group
Solute carrier family 19
Locus Type
gene with protein product
Location
2q36.3
Ensembl
ENSG00000135917
Associated Conditions (5)
Biotin-responsive basal ganglia disease
Inborn genetic diseases
SLC19A3-related disorder
Intellectual disability
Thiamine metabolism dysfunction syndrome 2 (biotin/thiamine-responsive basal ganglia disease type)
Key Variants
RS1064795112
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
Health Risk
RS1131691615
Conflicting classifications of pathogenicity
Health Risk
RS116533505
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
Health Risk
RS1233252115
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Inborn genetic diseases, Biotin-responsive basal ganglia disease
Health Risk
RS138363524
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
Health Risk
RS138839321
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Inborn genetic diseases, Biotin-responsive basal ganglia disease
Health Risk
RS141957107
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
Health Risk
RS142166552
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
Health Risk
RS145288025
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
Health Risk
RS145804755
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, SLC19A3-related disorder, Biotin-responsive basal ganglia disease
Health Risk
RS146949876
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, Inborn genetic diseases, Biotin-responsive basal ganglia disease
Health Risk
RS147205930
Conflicting classifications of pathogenicity
Biotin-responsive basal ganglia disease, SLC19A3-related disorder, Biotin-responsive basal ganglia disease
Health Risk
All Variants (101)
RSID Category Clinical Significance Conditions
RS780157041 Health Risk Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1282844765 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS137852957 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS137852958 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1474448985 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1553568249 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1553571227 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1553571813 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1559250774 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1574558558 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1695551164 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1695594361 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106318158 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106325851 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106325859 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106328711 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106328737 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106329218 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106329494 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2106329702 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470555117 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470572709 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470572798 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470572961 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470573249 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470573260 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470573722 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470573909 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470575306 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470580726 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470581058 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS713993048 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS746490830 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS773140674 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS773971505 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS786205213 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS863224204 Health Risk Pathogenic
RS866002450 Health Risk Pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS121917882 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Inborn genetic diseases, Biotin-responsive basal ganglia disease
RS1219632810 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1271884981 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1353757275 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS145999922 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1559247315 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1559252723 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS1695586409 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS200542114 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS2470573380 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
RS373198092 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Inborn genetic diseases, SLC19A3-related disorder
RS775835429 Health Risk Pathogenic/Likely pathogenic Biotin-responsive basal ganglia disease, Biotin-responsive basal ganglia disease
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