SHPK Chromosome 17
Sedoheptulokinase
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What This Gene Does
The protein encoded by this gene has weak homology to several carbohydrate kinases, a class of proteins involved in the phosphorylation of sugars as they enter a cell, inhibiting return across the cell membrane. Sequence variation between this novel gene and known carbohydrate kinases suggests the possibility of a different substrate, cofactor or changes in kinetic properties distinguishing it from other carbohydrate kinases. The gene resides in a region commonly deleted in cystinosis patients, suggesting a role as a modifier for the cystinosis phenotype. The genomic region is also rich in Alu repetitive sequences, frequently involved in chromosomal rearrangements. [provided by RefSeq, Jul 2008]
Associated Conditions (6)
Thyroid cancer
nonmedullary
1
Malignant tumor of esophagus
Familial cancer of breast
Isolated sedoheptulokinase deficiency
Key Variants
RS141166207
Conflicting classifications of pathogenicity
Thyroid cancer, nonmedullary, 1
Health Risk
RS200632887
Conflicting classifications of pathogenicity
Health Risk
RS564309046
Conflicting classifications of pathogenicity
Health Risk
RS753639475
Conflicting classifications of pathogenicity
Health Risk
All Variants (5)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS141166207 | Health Risk | Conflicting classifications of pathogenicity | Thyroid cancer, nonmedullary, 1 |
| RS200632887 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS564309046 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS753639475 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS748544120 | Trait | Affects | Isolated sedoheptulokinase deficiency, Isolated sedoheptulokinase deficiency |