SEMA4A Chromosome 1

Semaphorin 4A
41 variants 41 Health Risk

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What This Gene Does
This gene encodes a member of the semaphorin family of soluble and transmembrane proteins. Semaphorins are involved in numerous functions, including axon guidance, morphogenesis, carcinogenesis, and immunomodulation. The encoded protein is a single-pass type I membrane protein containing an immunoglobulin-like C2-type domain, a PSI domain and a sema domain. It inhibits axonal extension by providing local signals to specify territories inaccessible for growing axons. It is an activator of T-cell-mediated immunity and suppresses vascular endothelial growth factor (VEGF)-mediated endothelial cell migration and proliferation in vitro and angiogenesis in vivo. Mutations in this gene are associated with retinal degenerative diseases including retinitis pigmentosa type 35 (RP35) and cone-rod dystrophy type 10 (CORD10). Multiple alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, Sep 2010]
Gene Info
Gene Group
Semaphorins
Locus Type
gene with protein product
Location
1q22
Ensembl
ENSG00000196189
Associated Conditions (8)
Cone-rod dystrophy 10
Retinitis pigmentosa
Retinal dystrophy
SEMA4A-related disorder
Colorectal cancer
Optic atrophy
Helicoid peripapillary chorioretinal degeneration
Retinitis pigmentosa 35
Key Variants
All Variants (41)
RSID Category Clinical Significance Conditions
RS1028250483 Health Risk Conflicting classifications of pathogenicity
RS117762142 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS138398085 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, Retinal dystrophy
RS141177664 Health Risk Conflicting classifications of pathogenicity
RS141707567 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, SEMA4A-related disorder
RS144475266 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, Retinitis pigmentosa
RS144540956 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS145133730 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS145993678 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS146011929 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS146822426 Health Risk Conflicting classifications of pathogenicity Colorectal cancer, Cone-rod dystrophy 10, Retinitis pigmentosa
RS148674059 Health Risk Conflicting classifications of pathogenicity
RS148852472 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, Retinitis pigmentosa
RS149652495 Health Risk Conflicting classifications of pathogenicity Retinal dystrophy, Retinitis pigmentosa, Cone-rod dystrophy 10
RS149711133 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS151260330 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, Retinitis pigmentosa
RS1572428364 Health Risk Conflicting classifications of pathogenicity Retinal dystrophy, Retinal dystrophy
RS1655391926 Health Risk Conflicting classifications of pathogenicity Retinal dystrophy, Retinal dystrophy
RS199696322 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, Retinal dystrophy
RS201715448 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Retinal dystrophy
RS373565051 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS374441472 Health Risk Conflicting classifications of pathogenicity
RS562037528 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS56271605 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS568949451 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS577699691 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS577740555 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS753853752 Health Risk Conflicting classifications of pathogenicity
RS755693576 Health Risk Conflicting classifications of pathogenicity
RS756475595 Health Risk Conflicting classifications of pathogenicity
RS757466000 Health Risk Conflicting classifications of pathogenicity Retinitis pigmentosa, Cone-rod dystrophy 10, SEMA4A-related disorder
RS759638923 Health Risk Conflicting classifications of pathogenicity
RS760609808 Health Risk Conflicting classifications of pathogenicity Retinal dystrophy, Retinal dystrophy
RS76347207 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS763670204 Health Risk Conflicting classifications of pathogenicity Retinal dystrophy, Retinal dystrophy
RS768178231 Health Risk Conflicting classifications of pathogenicity Retinal dystrophy, Retinal dystrophy
RS772147085 Health Risk Conflicting classifications of pathogenicity Cone-rod dystrophy 10, Retinitis pigmentosa, Cone-rod dystrophy 10
RS2528301563 Health Risk Likely pathogenic Retinal dystrophy, Retinal dystrophy
RS1249149946 Health Risk Pathogenic Helicoid peripapillary chorioretinal degeneration, Helicoid peripapillary chorioretinal degeneration
RS1653548589 Health Risk Pathogenic Retinitis pigmentosa, Retinitis pigmentosa
RS267607034 Health Risk Pathogenic Cone-rod dystrophy 10, Retinitis pigmentosa 35, Cone-rod dystrophy 10
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