SELENON Chromosome 1

Selenoprotein N
130 variants 130 Health Risk

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What This Gene Does
This gene encodes a glycoprotein that is localized in the endoplasmic reticulum. It plays an important role in cell protection against oxidative stress, and in the regulation of redox-related calcium homeostasis. Mutations in this gene are associated with early onset muscle disorders, referred to as SEPN1-related myopathy. SEPN1-related myopathy consists of 4 autosomal recessive disorders, originally thought to be separate entities: rigid spine muscular dystrophy (RSMD1), the classical form of multiminicore disease, desmin related myopathy with Mallory-body like inclusions, and congenital fiber-type disproportion (CFTD). This protein is a selenoprotein, containing the rare amino acid selenocysteine (Sec). Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. A second stop-codon redefinition element (SRE) adjacent to the UGA codon has been identified in this gene (PMID:15791204). SRE is a phylogenetically conserved stem-loop structure that stimulates readthrough at the UGA codon, and augments the Sec insertion efficiency by SECIS. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Dec 2016]
Gene Info
Gene Group
"EF-hand domain containing|Selenoproteins"
Locus Type
gene with protein product
Location
1p36.11
Ensembl
ENSG00000162430
Associated Conditions (13)
Eichsfeld type congenital muscular dystrophy
Inborn genetic diseases
Congenital myopathy with fiber type disproportion
SEPN1-related disorder
Congenital myopathy 4A
autosomal dominant
SELENON-related myopathy
Malignant tumor of esophagus
SELENON-related disorder
See cases
Abnormality of the musculature
Muscular dystrophy
Cleft lip/palate
Key Variants
RS1050852336
Conflicting classifications of pathogenicity
Eichsfeld type congenital muscular dystrophy, Inborn genetic diseases, Eichsfeld type congenital muscular dystrophy
Health Risk
RS1176143542
Conflicting classifications of pathogenicity
Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
Health Risk
RS121908188
Conflicting classifications of pathogenicity
Congenital myopathy with fiber type disproportion, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
Health Risk
RS1286430947
Conflicting classifications of pathogenicity
Eichsfeld type congenital muscular dystrophy, Inborn genetic diseases, Eichsfeld type congenital muscular dystrophy
Health Risk
RS139020143
Conflicting classifications of pathogenicity
SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SELENON-related disorder
Health Risk
RS141295085
Conflicting classifications of pathogenicity
Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
Health Risk
RS149623434
Conflicting classifications of pathogenicity
Eichsfeld type congenital muscular dystrophy, SELENON-related disorder, Eichsfeld type congenital muscular dystrophy
Health Risk
RS183272965
Conflicting classifications of pathogenicity
Congenital myopathy with fiber type disproportion, Eichsfeld type congenital muscular dystrophy, SELENON-related disorder
Health Risk
RS184807941
Conflicting classifications of pathogenicity
SEPN1-related disorder, SEPN1-related disorder
Health Risk
RS199742668
Conflicting classifications of pathogenicity
SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SELENON-related disorder
Health Risk
RS199911454
Conflicting classifications of pathogenicity
SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
Health Risk
RS200128474
Conflicting classifications of pathogenicity
Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Congenital myopathy with fiber type disproportion
Health Risk
All Variants (130)
RSID Category Clinical Significance Conditions
RS1050852336 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Inborn genetic diseases, Eichsfeld type congenital muscular dystrophy
RS1176143542 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS121908188 Health Risk Conflicting classifications of pathogenicity Congenital myopathy with fiber type disproportion, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
RS1286430947 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Inborn genetic diseases, Eichsfeld type congenital muscular dystrophy
RS139020143 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SELENON-related disorder
RS141295085 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS149623434 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SELENON-related disorder, Eichsfeld type congenital muscular dystrophy
RS183272965 Health Risk Conflicting classifications of pathogenicity Congenital myopathy with fiber type disproportion, Eichsfeld type congenital muscular dystrophy, SELENON-related disorder
RS184807941 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, SEPN1-related disorder
RS199742668 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SELENON-related disorder
RS199911454 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
RS200128474 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Congenital myopathy with fiber type disproportion
RS200724231 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy
RS200765195 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy
RS201066183 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS201692549 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Congenital myopathy with fiber type disproportion
RS368377980 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS370300935 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS371398538 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy
RS377537585 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
RS398124359 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Congenital myopathy with fiber type disproportion
RS41284305 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy
RS41284307 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
RS745886248 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Congenital myopathy with fiber type disproportion, See cases
RS750138587 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS751927853 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS752169625 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS753774853 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS754350384 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
RS757446463 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS759256016 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS767530943 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS770747626 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS773670891 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Congenital myopathy with fiber type disproportion, Eichsfeld type congenital muscular dystrophy
RS779080942 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, Eichsfeld type congenital muscular dystrophy, SEPN1-related disorder
RS866566089 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS886038656 Health Risk Conflicting classifications of pathogenicity SEPN1-related disorder, SEPN1-related disorder
RS886038660 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS934913626 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS978886878 Health Risk Conflicting classifications of pathogenicity Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS1057517819 Health Risk Likely pathogenic
RS121908186 Health Risk Likely pathogenic Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS1333001112 Health Risk Likely pathogenic Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS2047928865 Health Risk Likely pathogenic See cases, Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS2047936719 Health Risk Likely pathogenic Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS2124437555 Health Risk Likely pathogenic
RS2124448112 Health Risk Likely pathogenic Abnormality of the musculature, Abnormality of the musculature
RS2524960858 Health Risk Likely pathogenic Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS2524960860 Health Risk Likely pathogenic Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
RS2524981730 Health Risk Likely pathogenic Eichsfeld type congenital muscular dystrophy, Eichsfeld type congenital muscular dystrophy
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