SCUBE3 Chromosome 6
Signal peptide, CUB domain and EGF like domain containing 3
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What This Gene Does
This gene encodes a member of the signal peptide, complement subcomponents C1r/C1s, Uegf, bone morphogenetic protein-1 and epidermal growth factor-like domain containing protein family. Overexpression of this gene in human embryonic kidney cells results in secretion of a glycosylated form of the protein that forms oligomers and tethers to the cell surface. This gene is upregulated in lung cancer tumor tissue compared to healthy tissue and is associated with loss of the epithelial marker E-cadherin and with increased expression of vimentin, a mesenchymal marker. In addition, the protein encoded by this gene is a transforming growth factor beta receptor ligand, and when secreted by cancer cells, it can be cleaved in vitro to release the N-terminal epidermal growth factor-like repeat domain and the C-terminal complement subcomponents C1r/C1s domain. Both the full length protein and C-terminal fragment can bind to the transforming growth factor beta type II receptor to promote the epithelial-mesenchymal transition and tumor angiogenesis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]
Associated Conditions (7)
Abnormality of the dentition
Abnormal facial shape
Short stature
Abnormality of the skeletal system
facial dysmorphism
and skeletal anomalies with or without cardiac anomalies 2
Inborn genetic diseases
Key Variants
RS1436996181
Conflicting classifications of pathogenicity
Abnormality of the dentition, Abnormal facial shape, Short stature
Health Risk
RS61745528
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS1397172310
Pathogenic
Abnormality of the dentition, Abnormal facial shape, Short stature
Health Risk
RS1783419625
Pathogenic
Abnormality of the dentition, Abnormal facial shape, Short stature
Health Risk
RS1783620400
Pathogenic
Abnormality of the dentition, Abnormal facial shape, Short stature
Health Risk
RS1784124318
Pathogenic
Health Risk
RS1784221557
Pathogenic
Short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2
Health Risk
RS1784291936
Pathogenic
Abnormality of the dentition, Abnormal facial shape, Short stature
Health Risk
RS751478115
Pathogenic/Likely pathogenic
Abnormality of the dentition, Abnormal facial shape, Short stature
Health Risk
All Variants (9)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1436996181 | Health Risk | Conflicting classifications of pathogenicity | Abnormality of the dentition, Abnormal facial shape, Short stature |
| RS61745528 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS1397172310 | Health Risk | Pathogenic | Abnormality of the dentition, Abnormal facial shape, Short stature |
| RS1783419625 | Health Risk | Pathogenic | Abnormality of the dentition, Abnormal facial shape, Short stature |
| RS1783620400 | Health Risk | Pathogenic | Abnormality of the dentition, Abnormal facial shape, Short stature |
| RS1784124318 | Health Risk | Pathogenic | — |
| RS1784221557 | Health Risk | Pathogenic | Short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2 |
| RS1784291936 | Health Risk | Pathogenic | Abnormality of the dentition, Abnormal facial shape, Short stature |
| RS751478115 | Health Risk | Pathogenic/Likely pathogenic | Abnormality of the dentition, Abnormal facial shape, Short stature |