SCP2 Chromosome 1

Sterol carrier protein 2
33 variants 33 Health Risk

Upload your DNA to see your personal genotypes for variants in SCP2.

What This Gene Does
This gene encodes two proteins: sterol carrier protein X (SCPx) and sterol carrier protein 2 (SCP2), as a result of transcription initiation from 2 independently regulated promoters. The transcript initiated from the proximal promoter encodes the longer SCPx protein, and the transcript initiated from the distal promoter encodes the shorter SCP2 protein, with the 2 proteins sharing a common C-terminus. Evidence suggests that the SCPx protein is a peroxisome-associated thiolase that is involved in the oxidation of branched chain fatty acids, while the SCP2 protein is thought to be an intracellular lipid transfer protein. This gene is highly expressed in organs involved in lipid metabolism, and may play a role in Zellweger syndrome, in which cells are deficient in peroxisomes and have impaired bile acid synthesis. Alternative splicing of this gene produces multiple transcript variants, some encoding different isoforms.[provided by RefSeq, Aug 2010]
Gene Info
Gene Group
"MicroRNA protein coding host genes|SCP2 domain containing"
Locus Type
gene with protein product
Location
1p32.3
Ensembl
ENSG00000116171
Associated Conditions (4)
SCP2-related disorder
Sterol carrier protein 2 deficiency
Hepatocellular carcinoma
Ovarian cancer
Key Variants
All Variants (33)
RSID Category Clinical Significance Conditions
RS143534838 Health Risk Conflicting classifications of pathogenicity
RS147697594 Health Risk Conflicting classifications of pathogenicity
RS148423275 Health Risk Conflicting classifications of pathogenicity
RS185811440 Health Risk Conflicting classifications of pathogenicity SCP2-related disorder, SCP2-related disorder
RS202234745 Health Risk Conflicting classifications of pathogenicity
RS2150121906 Health Risk Conflicting classifications of pathogenicity
RS369597903 Health Risk Conflicting classifications of pathogenicity
RS376582235 Health Risk Conflicting classifications of pathogenicity
RS74638331 Health Risk Conflicting classifications of pathogenicity
RS753547956 Health Risk Conflicting classifications of pathogenicity SCP2-related disorder, SCP2-related disorder
RS761545816 Health Risk Conflicting classifications of pathogenicity SCP2-related disorder, SCP2-related disorder
RS764929170 Health Risk Conflicting classifications of pathogenicity
RS774694600 Health Risk Conflicting classifications of pathogenicity
RS1318177330 Health Risk Likely pathogenic
RS144132787 Health Risk Likely pathogenic Sterol carrier protein 2 deficiency, SCP2-related disorder, Hepatocellular carcinoma
RS1557609323 Health Risk Likely pathogenic
RS2524439055 Health Risk Likely pathogenic
RS2524733814 Health Risk Likely pathogenic
RS370191484 Health Risk Likely pathogenic
RS1258568007 Health Risk Pathogenic
RS1316356500 Health Risk Pathogenic
RS1572119109 Health Risk Pathogenic Sterol carrier protein 2 deficiency, Sterol carrier protein 2 deficiency
RS2150111242 Health Risk Pathogenic
RS2524498600 Health Risk Pathogenic
RS2524499368 Health Risk Pathogenic
RS2524652526 Health Risk Pathogenic
RS369561869 Health Risk Pathogenic Sterol carrier protein 2 deficiency, SCP2-related disorder, Sterol carrier protein 2 deficiency
RS376277989 Health Risk Pathogenic
RS746730267 Health Risk Pathogenic
RS756309899 Health Risk Pathogenic
RS756891047 Health Risk Pathogenic
RS910513941 Health Risk Pathogenic
RS772506944 Health Risk Pathogenic/Likely pathogenic Sterol carrier protein 2 deficiency, Sterol carrier protein 2 deficiency
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