PSEN2 Chromosome 1
Presenilin 2
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What This Gene Does
Alzheimer's disease (AD) patients with an inherited form of the disease carry mutations in the presenilin proteins (PSEN1 or PSEN2) or the amyloid precursor protein (APP). These disease-linked mutations result in increased production of the longer form of amyloid-beta (main component of amyloid deposits found in AD brains). Presenilins are postulated to regulate APP processing through their effects on gamma-secretase, an enzyme that cleaves APP. Also, it is thought that the presenilins are involved in the cleavage of the Notch receptor such that, they either directly regulate gamma-secretase activity, or themselves act are protease enzymes. Two alternatively spliced transcript variants encoding different isoforms of PSEN2 have been identified. [provided by RefSeq, Jul 2008]
Gene Info
Gene Group
"Presenilin family|Gamma-secretase complex subunits"
Locus Type
gene with protein product
Location
1q42.13
Ensembl
ENSG00000143801
Associated Conditions (5)
Alzheimer disease 4
PSEN2-related disorder
Dilated cardiomyopathy 1V
Primary dilated cardiomyopathy
Huntington disease-like syndrome
Key Variants
RS1208742830
Conflicting classifications of pathogenicity
Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4
Health Risk
RS138836272
Conflicting classifications of pathogenicity
Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V
Health Risk
RS139972151
Conflicting classifications of pathogenicity
Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4
Health Risk
RS143059995
Conflicting classifications of pathogenicity
Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V
Health Risk
RS143501870
Conflicting classifications of pathogenicity
Primary dilated cardiomyopathy, Alzheimer disease 4, Dilated cardiomyopathy 1V
Health Risk
RS143912759
Conflicting classifications of pathogenicity
Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4
Health Risk
RS145010538
Conflicting classifications of pathogenicity
Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V
Health Risk
RS145129440
Conflicting classifications of pathogenicity
Alzheimer disease 4, Dilated cardiomyopathy 1V, Alzheimer disease 4
Health Risk
RS188598190
Conflicting classifications of pathogenicity
Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4
Health Risk
RS199587016
Conflicting classifications of pathogenicity
Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V
Health Risk
RS200610057
Conflicting classifications of pathogenicity
Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V
Health Risk
RS200636353
Conflicting classifications of pathogenicity
Alzheimer disease 4, Dilated cardiomyopathy 1V, Alzheimer disease 4
Health Risk
All Variants (28)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1208742830 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4 |
| RS138836272 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS139972151 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4 |
| RS143059995 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS143501870 | Health Risk | Conflicting classifications of pathogenicity | Primary dilated cardiomyopathy, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS143912759 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4 |
| RS145010538 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS145129440 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, Dilated cardiomyopathy 1V, Alzheimer disease 4 |
| RS188598190 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, PSEN2-related disorder, Alzheimer disease 4 |
| RS199587016 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS200610057 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS200636353 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, Dilated cardiomyopathy 1V, Alzheimer disease 4 |
| RS200801915 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS202003390 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS202133351 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, Dilated cardiomyopathy 1V, Alzheimer disease 4 |
| RS202178897 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, PSEN2-related disorder |
| RS367855127 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, Dilated cardiomyopathy 1V, Alzheimer disease 4 |
| RS753503617 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS773522773 | Health Risk | Conflicting classifications of pathogenicity | Dilated cardiomyopathy 1V, Alzheimer disease 4, Dilated cardiomyopathy 1V |
| RS773754382 | Health Risk | Conflicting classifications of pathogenicity | Alzheimer disease 4, Alzheimer disease 4 |
| RS866044092 | Health Risk | Conflicting classifications of pathogenicity | Huntington disease-like syndrome, Alzheimer disease 4, Huntington disease-like syndrome |
| RS1553268799 | Health Risk | Likely pathogenic | Alzheimer disease 4, Alzheimer disease 4 |
| RS28936379 | Health Risk | Pathogenic | Alzheimer disease 4, Alzheimer disease 4 |
| RS28936380 | Health Risk | Pathogenic | Alzheimer disease 4, Alzheimer disease 4 |
| RS63749884 | Health Risk | Pathogenic | Alzheimer disease 4, Alzheimer disease 4 |
| RS63750048 | Health Risk | Pathogenic | Alzheimer disease 4, Alzheimer disease 4 |
| RS63750215 | Health Risk | Pathogenic | Alzheimer disease 4, Alzheimer disease 4 |
| RS63749851 | Health Risk | Pathogenic/Likely pathogenic | Alzheimer disease 4, Alzheimer disease 4 |