PHF6 Chromosome X
PHD finger protein 6
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What This Gene Does
This gene is a member of the plant homeodomain (PHD)-like finger (PHF) family. It encodes a protein with two PHD-type zinc finger domains, indicating a potential role in transcriptional regulation, that localizes to the nucleolus. Mutations affecting the coding region of this gene or the splicing of the transcript have been associated with Borjeson-Forssman-Lehmann syndrome (BFLS), a disorder characterized by cognitive disability, epilepsy, hypogonadism, hypometabolism, obesity, swelling of subcutaneous tissue of the face, narrow palpebral fissures, and large ears. Alternate splicing results in multiple transcript variants, encoding different isoforms. [provided by RefSeq, Jun 2010]
Gene Info
Gene Group
PHD finger proteins
Locus Type
gene with protein product
Location
Xq26.2
Ensembl
ENSG00000156531
Associated Conditions (12)
Inborn genetic diseases
PHF6-related disorder
Borjeson-Forssman-Lehmann syndrome
Gastric cancer
Nonpapillary renal cell carcinoma
Thyroid cancer
nonmedullary
1
Intellectual disability
Hereditary spastic paraplegia 4
See cases
Hirsutism
Key Variants
RS1054974225
Conflicting classifications of pathogenicity
Inborn genetic diseases, PHF6-related disorder, Borjeson-Forssman-Lehmann syndrome
Health Risk
RS112199174
Conflicting classifications of pathogenicity
Borjeson-Forssman-Lehmann syndrome, Inborn genetic diseases, PHF6-related disorder
Health Risk
RS188961105
Conflicting classifications of pathogenicity
Borjeson-Forssman-Lehmann syndrome, Inborn genetic diseases, PHF6-related disorder
Health Risk
RS200423380
Conflicting classifications of pathogenicity
Borjeson-Forssman-Lehmann syndrome, PHF6-related disorder, Borjeson-Forssman-Lehmann syndrome
Health Risk
RS2520676263
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS774353684
Conflicting classifications of pathogenicity
Borjeson-Forssman-Lehmann syndrome, Inborn genetic diseases, PHF6-related disorder
Health Risk
RS794727879
Conflicting classifications of pathogenicity
Borjeson-Forssman-Lehmann syndrome, Thyroid cancer, nonmedullary
Health Risk
RS1064795103
Likely pathogenic
Health Risk
RS1569334260
Likely pathogenic
Borjeson-Forssman-Lehmann syndrome, Borjeson-Forssman-Lehmann syndrome
Health Risk
RS1569343210
Likely pathogenic
Health Risk
RS2077467347
Likely pathogenic
Borjeson-Forssman-Lehmann syndrome, Borjeson-Forssman-Lehmann syndrome
Health Risk
RS2077475668
Likely pathogenic
Health Risk
All Variants (52)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS797044908 | Health Risk | Pathogenic | Inborn genetic diseases, Inborn genetic diseases |
| RS864309532 | Health Risk | Pathogenic | Borjeson-Forssman-Lehmann syndrome, Borjeson-Forssman-Lehmann syndrome |