PAX5 Chromosome 9

Paired box 5
24 variants 24 Health Risk

Upload your DNA to see your personal genotypes for variants in PAX5.

What This Gene Does
This gene encodes a member of the paired box (PAX) family of transcription factors. The central feature of this gene family is a novel, highly conserved DNA-binding motif, known as the paired box. Paired box transcription factors are important regulators in early development, and alterations in the expression of their genes are thought to contribute to neoplastic transformation. This gene encodes the B-cell lineage specific activator protein that is expressed at early, but not late stages of B-cell differentiation. Its expression has also been detected in developing CNS and testis and so the encoded protein may also play a role in neural development and spermatogenesis. This gene is located at 9p13, which is involved in t(9;14)(p13;q32) translocations recurring in small lymphocytic lymphomas of the plasmacytoid subtype, and in derived large-cell lymphomas. This translocation brings the potent E-mu enhancer of the IgH gene into close proximity of the PAX5 promoter, suggesting that the deregulation of transcription of this gene contributes to the pathogenesis of these lymphomas. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2013]
Gene Info
Gene Group
"PRD class homeoboxes and pseudogenes|Paired boxes|MicroRNA protein coding host genes"
Locus Type
gene with protein product
Location
9p13.2
Ensembl
ENSG00000196092
Associated Conditions (8)
Leukemia
acute lymphoblastic
susceptibility to
3
Inborn genetic diseases
PAX5-related disorder
Neurodevelopmental disorder
Acute lymphoid leukemia
Key Variants
All Variants (24)
RSID Category Clinical Significance Conditions
RS137870876 Health Risk Conflicting classifications of pathogenicity Leukemia, acute lymphoblastic, susceptibility to
RS139492230 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS1830348981 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS2132472428 Health Risk Conflicting classifications of pathogenicity Leukemia, acute lymphoblastic, susceptibility to
RS371549995 Health Risk Conflicting classifications of pathogenicity PAX5-related disorder, Inborn genetic diseases, PAX5-related disorder
RS577863510 Health Risk Conflicting classifications of pathogenicity Neurodevelopmental disorder, Neurodevelopmental disorder
RS766161582 Health Risk Conflicting classifications of pathogenicity Leukemia, acute lymphoblastic, susceptibility to
RS1588104877 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS1841274813 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2131591339 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2132424384 Health Risk Likely pathogenic Neurodevelopmental disorder, Leukemia, acute lymphoblastic
RS2132470416 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2132470584 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2493186313 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2494412874 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2494512458 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2494512979 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS2494556210 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS750194822 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS780753361 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia, Acute lymphoid leukemia
RS926053251 Health Risk Likely pathogenic Acute lymphoid leukemia, Acute lymphoid leukemia
RS1337956293 Health Risk Pathogenic Neurodevelopmental disorder, Neurodevelopmental disorder
RS2132194720 Health Risk Pathogenic Neurodevelopmental disorder, Leukemia, acute lymphoblastic
RS398123063 Health Risk risk factor Leukemia, acute lymphoblastic, susceptibility to
Sign Up to Analyze Your DNA Log In