NECTIN1 Chromosome 11

Nectin cell adhesion molecule 1
29 variants 29 Health Risk

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What This Gene Does
This gene encodes an adhesion protein that plays a role in the organization of adherens junctions and tight junctions in epithelial and endothelial cells. The protein is a calcium(2+)-independent cell-cell adhesion molecule that belongs to the immunoglobulin superfamily and has 3 extracellular immunoglobulin-like loops, a single transmembrane domain (in some isoforms), and a cytoplasmic region. This protein acts as a receptor for glycoprotein D (gD) of herpes simplex viruses 1 and 2 (HSV-1, HSV-2), and pseudorabies virus (PRV) and mediates viral entry into epithelial and neuronal cells. Mutations in this gene cause cleft lip and palate/ectodermal dysplasia 1 syndrome (CLPED1) as well as non-syndromic cleft lip with or without cleft palate (CL/P). Alternative splicing results in multiple transcript variants encoding proteins with distinct C-termini. [provided by RefSeq, Oct 2009]
Gene Info
Gene Group
"CD molecules|V-set domain containing|C2-set domain containing|Nectins and nectin-like molecules"
Locus Type
gene with protein product
Location
11q23.3
Ensembl
ENSG00000110400
Associated Conditions (4)
Cleft lip/palate-ectodermal dysplasia syndrome
NECTIN1-related disorder
Malignant tumor of urinary bladder
Orofacial cleft 7
Key Variants
RS116441631
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS137991779
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS139418917
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS140389200
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS142753103
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS142863092
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS142930935
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS144990451
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS145986556
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS146113849
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS146567321
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS146919951
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
All Variants (29)
RSID Category Clinical Significance Conditions
RS116441631 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS137991779 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS139418917 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS140389200 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS142753103 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS142863092 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS142930935 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS144990451 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS145986556 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS146113849 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS146567321 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS146919951 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS188936128 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS202095358 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS368910346 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS375284374 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS542760632 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS559278757 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS7131391 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS761931104 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS78809001 Health Risk Conflicting classifications of pathogenicity Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
RS889179187 Health Risk Conflicting classifications of pathogenicity Malignant tumor of urinary bladder, Malignant tumor of urinary bladder
RS2135551778 Health Risk Likely pathogenic Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS778591472 Health Risk Likely pathogenic Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS104894281 Health Risk Pathogenic Cleft lip/palate-ectodermal dysplasia syndrome, Orofacial cleft 7, Cleft lip/palate-ectodermal dysplasia syndrome
RS745849418 Health Risk Pathogenic
RS769476648 Health Risk Pathogenic Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS876657374 Health Risk Pathogenic Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
RS878853255 Health Risk Pathogenic Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
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