NECTIN1 Chromosome 11
Nectin cell adhesion molecule 1
Upload your DNA to see your personal genotypes for variants in NECTIN1.
What This Gene Does
This gene encodes an adhesion protein that plays a role in the organization of adherens junctions and tight junctions in epithelial and endothelial cells. The protein is a calcium(2+)-independent cell-cell adhesion molecule that belongs to the immunoglobulin superfamily and has 3 extracellular immunoglobulin-like loops, a single transmembrane domain (in some isoforms), and a cytoplasmic region. This protein acts as a receptor for glycoprotein D (gD) of herpes simplex viruses 1 and 2 (HSV-1, HSV-2), and pseudorabies virus (PRV) and mediates viral entry into epithelial and neuronal cells. Mutations in this gene cause cleft lip and palate/ectodermal dysplasia 1 syndrome (CLPED1) as well as non-syndromic cleft lip with or without cleft palate (CL/P). Alternative splicing results in multiple transcript variants encoding proteins with distinct C-termini. [provided by RefSeq, Oct 2009]
Gene Info
Gene Group
"CD molecules|V-set domain containing|C2-set domain containing|Nectins and nectin-like molecules"
Locus Type
gene with protein product
Location
11q23.3
Ensembl
ENSG00000110400
Associated Conditions (4)
Cleft lip/palate-ectodermal dysplasia syndrome
NECTIN1-related disorder
Malignant tumor of urinary bladder
Orofacial cleft 7
Key Variants
RS116441631
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS137991779
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS139418917
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS140389200
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS142753103
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS142863092
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS142930935
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS144990451
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS145986556
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS146113849
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS146567321
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
RS146919951
Conflicting classifications of pathogenicity
Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome
Health Risk
All Variants (29)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS116441631 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS137991779 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS139418917 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS140389200 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS142753103 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS142863092 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS142930935 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS144990451 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS145986556 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS146113849 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS146567321 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS146919951 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS188936128 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS202095358 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS368910346 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS375284374 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS542760632 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS559278757 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS7131391 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS761931104 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS78809001 | Health Risk | Conflicting classifications of pathogenicity | Cleft lip/palate-ectodermal dysplasia syndrome, NECTIN1-related disorder, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS889179187 | Health Risk | Conflicting classifications of pathogenicity | Malignant tumor of urinary bladder, Malignant tumor of urinary bladder |
| RS2135551778 | Health Risk | Likely pathogenic | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS778591472 | Health Risk | Likely pathogenic | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS104894281 | Health Risk | Pathogenic | Cleft lip/palate-ectodermal dysplasia syndrome, Orofacial cleft 7, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS745849418 | Health Risk | Pathogenic | — |
| RS769476648 | Health Risk | Pathogenic | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS876657374 | Health Risk | Pathogenic | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |
| RS878853255 | Health Risk | Pathogenic | Cleft lip/palate-ectodermal dysplasia syndrome, Cleft lip/palate-ectodermal dysplasia syndrome |