NCSTN Chromosome 1

Nicastrin
21 variants 21 Health Risk

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What This Gene Does
This gene encodes a type I transmembrane glycoprotein that is an integral component of the multimeric gamma-secretase complex. The encoded protein cleaves integral membrane proteins, including Notch receptors and beta-amyloid precursor protein, and may be a stabilizing cofactor required for gamma-secretase complex assembly. The cleavage of beta-amyloid precursor protein yields amyloid beta peptide, the main component of the neuritic plaque and the hallmark lesion in the brains of patients with Alzheimer's disease; however, the nature of the encoded protein's role in Alzheimer's disease is not known for certain. Mutations in this gene are associated with familial acne inversa. A pseudogene of this gene is present on chromosome 21. Alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Feb 2014]
Gene Info
Gene Group
Gamma-secretase complex subunits
Locus Type
gene with protein product
Location
1q23.2
Ensembl
ENSG00000162736
Associated Conditions (6)
Inborn genetic diseases
Acne inversa
familial
1
NCSTN-related disorder
Abnormality of the skin
Key Variants
All Variants (21)
RSID Category Clinical Significance Conditions
RS149288103 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS1553210405 Health Risk Conflicting classifications of pathogenicity Acne inversa, familial, 1
RS200634807 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS202046846 Health Risk Conflicting classifications of pathogenicity Acne inversa, familial, 1
RS374951668 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS375632985 Health Risk Conflicting classifications of pathogenicity Acne inversa, familial, 1
RS1361408137 Health Risk Likely pathogenic
RS1571202126 Health Risk Likely pathogenic
RS2101899012 Health Risk Likely pathogenic
RS1085307081 Health Risk Pathogenic Acne inversa, familial, 1
RS1266104510 Health Risk Pathogenic
RS1347055289 Health Risk Pathogenic Acne inversa, familial, 1
RS1553210984 Health Risk Pathogenic Acne inversa, familial, 1
RS1553211087 Health Risk Pathogenic Acne inversa, familial, 1
RS2101889658 Health Risk Pathogenic Acne inversa, familial, 1
RS2101906549 Health Risk Pathogenic
RS2101909450 Health Risk Pathogenic Abnormality of the skin, Abnormality of the skin
RS2525536152 Health Risk Pathogenic Acne inversa, familial, 1
RS2525537394 Health Risk Pathogenic
RS387906896 Health Risk Pathogenic Acne inversa, familial, 1
RS771414318 Health Risk Pathogenic Acne inversa, familial, 1
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