KMT2A Chromosome 11

Lysine methyltransferase 2A
518 variants 518 Health Risk

Upload your DNA to see your personal genotypes for variants in KMT2A.

What This Gene Does
This gene encodes a transcriptional coactivator that plays an essential role in regulating gene expression during early development and hematopoiesis. The encoded protein contains multiple conserved functional domains. One of these domains, the SET domain, is responsible for its histone H3 lysine 4 (H3K4) methyltransferase activity which mediates chromatin modifications associated with epigenetic transcriptional activation. This protein is processed by the enzyme Taspase 1 into two fragments, MLL-C and MLL-N. These fragments reassociate and further assemble into different multiprotein complexes that regulate the transcription of specific target genes, including many of the HOX genes. Multiple chromosomal translocations involving this gene are the cause of certain acute lymphoid leukemias and acute myeloid leukemias. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Oct 2010]
Gene Info
Gene Group
"PHD finger proteins|Zinc fingers CXXC-type|Histone lysine methyltransferases|Bromodomain containing|SET domain containing"
Locus Type
gene with protein product
Location
11q23.3
Ensembl
ENSG00000118058
Associated Conditions (22)
Inborn genetic diseases
KMT2A-related disorder
Wiedemann-Steiner syndrome
Gastric cancer
Bilateral ptosis
Atypical behavior
Neurodevelopmental delay
Language disorder
Kabuki syndrome 1
Autism spectrum disorder
Intellectual disability
Rubinstein Taybi like syndrome
See cases
Neurodevelopmental disorder
Rare genetic intellectual disability
Microcephaly
Hirsutism
Cornelia de Lange syndrome 1
Adrenal cortex carcinoma
Squamous cell carcinoma of the head and neck
+2 more conditions
Key Variants
All Variants (518)
RSID Category Clinical Significance Conditions
RS2134400611 Health Risk Conflicting classifications of pathogenicity Wiedemann-Steiner syndrome, Wiedemann-Steiner syndrome
RS2496842179 Health Risk Conflicting classifications of pathogenicity Wiedemann-Steiner syndrome, Wiedemann-Steiner syndrome
RS2497033680 Health Risk Conflicting classifications of pathogenicity Wiedemann-Steiner syndrome, Wiedemann-Steiner syndrome
RS368659701 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS369566552 Health Risk Conflicting classifications of pathogenicity
RS369974258 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS370745462 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS370899148 Health Risk Conflicting classifications of pathogenicity
RS373345566 Health Risk Conflicting classifications of pathogenicity KMT2A-related disorder, Gastric cancer, KMT2A-related disorder
RS374005016 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Wiedemann-Steiner syndrome, Inborn genetic diseases
RS374420996 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS375240261 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS376161579 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS377485215 Health Risk Conflicting classifications of pathogenicity Wiedemann-Steiner syndrome, Inborn genetic diseases, Wiedemann-Steiner syndrome
RS377588214 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS377724112 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS527501404 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS528682281 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, KMT2A-related disorder, Inborn genetic diseases
RS540886080 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS550235275 Health Risk Conflicting classifications of pathogenicity KMT2A-related disorder, Inborn genetic diseases, KMT2A-related disorder
RS781816624 Health Risk Conflicting classifications of pathogenicity
RS781817780 Health Risk Conflicting classifications of pathogenicity
RS781819293 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781830267 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781855910 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781872314 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781886946 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781911944 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781919840 Health Risk Conflicting classifications of pathogenicity
RS781925449 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781929360 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases, Inborn genetic diseases
RS781933899 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781936420 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS781945281 Health Risk Conflicting classifications of pathogenicity
RS781995666 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782026566 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782067532 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782070742 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782080138 Health Risk Conflicting classifications of pathogenicity
RS782107354 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782113867 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782124549 Health Risk Conflicting classifications of pathogenicity
RS782151492 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782166364 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782171210 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782181274 Health Risk Conflicting classifications of pathogenicity
RS782184234 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782199472 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782210632 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS782226750 Health Risk Conflicting classifications of pathogenicity Wiedemann-Steiner syndrome, Inborn genetic diseases, Wiedemann-Steiner syndrome
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