HEXA Chromosome 15
Hexosaminidase subunit alpha
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What This Gene Does
This gene encodes a member of the glycosyl hydrolase 20 family of proteins. The encoded preproprotein is proteolytically processed to generate the alpha subunit of the lysosomal enzyme beta-hexosaminidase. This enzyme, together with the cofactor GM2 activator protein, catalyzes the degradation of the ganglioside GM2, and other molecules containing terminal N-acetyl hexosamines. Mutations in this gene lead to an accumulation of GM2 ganglioside in neurons, the underlying cause of neurodegenerative disorders termed the GM2 gangliosidoses, including Tay-Sachs disease (GM2-gangliosidosis type I). Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed. [provided by RefSeq, Jan 2016]
Gene Info
Gene Group
Hexosaminidases
Locus Type
gene with protein product
Location
15q23
Ensembl
ENSG00000213614
Associated Conditions (30)
Tay-Sachs disease
variant AB
HEXA-related disorder
Intellectual disability
GM2-GANGLIOSIDOSIS
CHRONIC
Gm2-gangliosidosis
adult
Inborn genetic diseases
Familial cancer of breast
B1 VARIANT
Squamous cell carcinoma of the head and neck
B1 variant
Global developmental delay
JUVENILE
Glioma susceptibility 1
GM2-gangliosidosis
adult-onset
GM2-ganglioside accumulation
Acute myeloid leukemia
+10 more conditions
Key Variants
RS1057519462
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS1057521137
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS121907973
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS121907976
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS121907977
Conflicting classifications of pathogenicity
Tay-Sachs disease, variant AB, Tay-Sachs disease
Health Risk
RS1229811721
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS1316178162
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS141120074
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS1555472543
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS1680245631
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS185764548
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
RS185797496
Conflicting classifications of pathogenicity
Tay-Sachs disease, Tay-Sachs disease
Health Risk
All Variants (266)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1555472270 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS1555472432 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS1555472440 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS1555473138 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS1555475498 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088612933 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088635332 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088635505 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088635583 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088660599 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088664194 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088690482 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088732981 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088766427 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088784856 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2088785868 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2089059318 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2140322856 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease, Tay-Sachs disease |
| RS2140324697 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2140324712 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2140326761 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2140328162 | Health Risk | Likely pathogenic | Tay-Sachs disease, Squamous cell carcinoma of the head and neck, Tay-Sachs disease |
| RS2542505621 | Health Risk | Likely pathogenic | Inborn genetic diseases, Inborn genetic diseases |
| RS2542514045 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542520312 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542520432 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542520435 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542520561 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542523032 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542523123 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542523154 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease, Tay-Sachs disease |
| RS2542526272 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542526335 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542528224 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542534160 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542534202 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542537779 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542537863 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542540049 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542540160 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542581414 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS2542582237 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS28941770 | Health Risk | Likely pathogenic | Tay-Sachs disease, B1 variant, Global developmental delay |
| RS28941771 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS543071358 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS750727201 | Health Risk | Likely pathogenic | Tay-Sachs disease, Inborn genetic diseases, HEXA-related disorder |
| RS756040251 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS759219683 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS770093080 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |
| RS773446161 | Health Risk | Likely pathogenic | Tay-Sachs disease, Tay-Sachs disease |