GPX4 Chromosome 19

Glutathione peroxidase 4
15 variants 15 Health Risk

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What This Gene Does
The protein encoded by this gene belongs to the glutathione peroxidase family, members of which catalyze the reduction of hydrogen peroxide, organic hydroperoxides and lipid hydroperoxides, and thereby protect cells against oxidative damage. Several isozymes of this gene family exist in vertebrates, which vary in cellular location and substrate specificity. This isozyme has a high preference for lipid hydroperoxides and protects cells against membrane lipid peroxidation and cell death. It is also required for normal sperm development; thus, it has been identified as a 'moonlighting' protein because of its ability to serve dual functions as a peroxidase, as well as a structural protein in mature spermatozoa. Mutations in this gene are associated with Sedaghatian type of spondylometaphyseal dysplasia (SMDS). This isozyme is also a selenoprotein, containing the rare amino acid selenocysteine (Sec) at its active site. Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Transcript variants resulting from alternative splicing or use of alternate promoters have been described to encode isoforms with different subcellular localization. [provided by RefSeq, Dec 2018]
Gene Info
Gene Group
"Selenoproteins|Glutathione peroxidase family"
Locus Type
gene with protein product
Location
19p13.3
Ensembl
ENSG00000167468
Associated Conditions (4)
Inborn genetic diseases
Spondylometaphyseal dysplasia
Sedaghatian type
GPX4-related disorder
Key Variants
All Variants (15)
RSID Category Clinical Significance Conditions
RS199515520 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS199787199 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS371892333 Health Risk Conflicting classifications of pathogenicity Spondylometaphyseal dysplasia, Sedaghatian type, Inborn genetic diseases
RS1555716575 Health Risk Likely pathogenic Spondylometaphyseal dysplasia, Sedaghatian type, Spondylometaphyseal dysplasia
RS1599808202 Health Risk Likely pathogenic
RS1686505064 Health Risk Likely pathogenic
RS2079656641 Health Risk Likely pathogenic
RS2512693319 Health Risk Likely pathogenic Spondylometaphyseal dysplasia, Sedaghatian type, Spondylometaphyseal dysplasia
RS763745871 Health Risk Likely pathogenic Spondylometaphyseal dysplasia, Sedaghatian type, GPX4-related disorder
RS1040467710 Health Risk Pathogenic
RS1599810980 Health Risk Pathogenic Spondylometaphyseal dysplasia, Sedaghatian type, Spondylometaphyseal dysplasia
RS2079656861 Health Risk Pathogenic
RS769967246 Health Risk Pathogenic Spondylometaphyseal dysplasia, Sedaghatian type, Spondylometaphyseal dysplasia
RS774824204 Health Risk Pathogenic
RS772394824 Health Risk Pathogenic/Likely pathogenic Spondylometaphyseal dysplasia, Sedaghatian type, Spondylometaphyseal dysplasia
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