GLIS2 Chromosome 16

GLIS family zinc finger 2
20 variants 20 Health Risk

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What This Gene Does
This gene is a member of the GLI-similar zinc finger protein family and encodes a nuclear transcription factor with five C2H2-type zinc finger domains. The protein encoded by this gene is widely expressed at low levels in the neural tube and peripheral nervous system and likely promotes neuronal differentiation. It is abundantly expressed in the kidney and may have a role in the regulation of kidney morphogenesis. p120 regulates the expression level of this protein and induces the cleavage of this protein's C-terminal zinc finger domain. This protein also promotes the nuclear translocation of p120. Mutations in this gene cause nephronophthisis (NPHP), an autosomal recessive kidney disease characterized by tubular basement membrane disruption, interstitial lymphohistiocytic cell infiltration, and development of cysts at the corticomedullary border of the kidneys.[provided by RefSeq, Jan 2010]
Gene Info
Gene Group
Zinc fingers C2H2-type
Locus Type
gene with protein product
Location
16p13.3
Ensembl
ENSG00000126603
Associated Conditions (10)
Nephronophthisis
Nephronophthisis 7
GLIS2-related disorder
Malignant tumor of esophagus
Hepatocellular carcinoma
Cervical cancer
Clear cell carcinoma of kidney
Sarcoma
Ovarian serous cystadenocarcinoma
Kidney disorder
Key Variants
All Variants (20)
RSID Category Clinical Significance Conditions
RS144447862 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, GLIS2-related disorder
RS150071733 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, Kidney disorder
RS150810544 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, GLIS2-related disorder
RS182526202 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, GLIS2-related disorder, Nephronophthisis
RS200720013 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, Nephronophthisis
RS2141132961 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis 7
RS371022001 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, Nephronophthisis
RS371341058 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis, Nephronophthisis 7
RS529581775 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis, Nephronophthisis 7
RS569937790 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis
RS746233571 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis, Nephronophthisis 7
RS750906253 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis, Nephronophthisis 7
RS751898309 Health Risk Conflicting classifications of pathogenicity GLIS2-related disorder, Nephronophthisis, GLIS2-related disorder
RS752036048 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis
RS753999588 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis
RS767819594 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis, Nephronophthisis 7
RS769088578 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, Nephronophthisis
RS775114398 Health Risk Conflicting classifications of pathogenicity Nephronophthisis, Nephronophthisis 7, Nephronophthisis
RS990927651 Health Risk Conflicting classifications of pathogenicity Nephronophthisis 7, Nephronophthisis, Nephronophthisis 7
RS878855335 Health Risk Pathogenic Nephronophthisis, Nephronophthisis 7, GLIS2-related disorder
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