CSTB Chromosome 21
Cystatin B
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What This Gene Does
The cystatin superfamily encompasses proteins that contain multiple cystatin-like sequences. Some of the members are active cysteine protease inhibitors, while others have lost or perhaps never acquired this inhibitory activity. There are three inhibitory families in the superfamily, including the type 1 cystatins (stefins), type 2 cystatins and kininogens. This gene encodes a stefin that functions as an intracellular thiol protease inhibitor. The protein is able to form a dimer stabilized by noncovalent forces, inhibiting papain and cathepsins l, h and b. The protein is thought to play a role in protecting against the proteases leaking from lysosomes. Evidence indicates that mutations in this gene are responsible for the primary defects in patients with progressive myoclonic epilepsy (EPM1). One type of mutation responsible for EPM1 is the expansion in the promoter region of this gene of a CCCCGCCCCGCG repeat from 2-3 copies to 30-78 copies. [provided by RefSeq, Jul 2016]
Gene Info
Gene Group
Cystatins, type 1
Locus Type
gene with protein product
Location
21q22.3
Ensembl
ENSG00000160213
Associated Conditions (13)
Progressive myoclonic epilepsy
Unverricht-Lundborg syndrome
Inborn genetic diseases
CSTB-related disorder
Glioma susceptibility 1
Chorea
Dyskinesia
Encephalopathy
Microcephaly
Cerebral dysmyelination
Hepatocellular carcinoma
8 conditions
Self-limited epilepsy with centrotemporal spikes
Key Variants
RS1044894207
Conflicting classifications of pathogenicity
Progressive myoclonic epilepsy, Progressive myoclonic epilepsy
Health Risk
RS1057521317
Conflicting classifications of pathogenicity
Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy
Health Risk
RS143062585
Conflicting classifications of pathogenicity
Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome
Health Risk
RS143153487
Conflicting classifications of pathogenicity
Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy, Inborn genetic diseases
Health Risk
RS1555888363
Conflicting classifications of pathogenicity
Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy
Health Risk
RS2084002305
Conflicting classifications of pathogenicity
Progressive myoclonic epilepsy, Progressive myoclonic epilepsy
Health Risk
RS555930471
Conflicting classifications of pathogenicity
Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome
Health Risk
RS570768038
Conflicting classifications of pathogenicity
Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy
Health Risk
RS757593576
Conflicting classifications of pathogenicity
Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome
Health Risk
RS776181852
Conflicting classifications of pathogenicity
Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome
Health Risk
RS779920568
Conflicting classifications of pathogenicity
Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome
Health Risk
RS11553836
Likely pathogenic
Health Risk
All Variants (27)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1044894207 | Health Risk | Conflicting classifications of pathogenicity | Progressive myoclonic epilepsy, Progressive myoclonic epilepsy |
| RS1057521317 | Health Risk | Conflicting classifications of pathogenicity | Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy |
| RS143062585 | Health Risk | Conflicting classifications of pathogenicity | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS143153487 | Health Risk | Conflicting classifications of pathogenicity | Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy, Inborn genetic diseases |
| RS1555888363 | Health Risk | Conflicting classifications of pathogenicity | Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy |
| RS2084002305 | Health Risk | Conflicting classifications of pathogenicity | Progressive myoclonic epilepsy, Progressive myoclonic epilepsy |
| RS555930471 | Health Risk | Conflicting classifications of pathogenicity | Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome |
| RS570768038 | Health Risk | Conflicting classifications of pathogenicity | Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy |
| RS757593576 | Health Risk | Conflicting classifications of pathogenicity | Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome |
| RS776181852 | Health Risk | Conflicting classifications of pathogenicity | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS779920568 | Health Risk | Conflicting classifications of pathogenicity | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS11553836 | Health Risk | Likely pathogenic | — |
| RS386833439 | Health Risk | Likely pathogenic | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS386833440 | Health Risk | Likely pathogenic | Unverricht-Lundborg syndrome, Glioma susceptibility 1, Unverricht-Lundborg syndrome |
| RS386833441 | Health Risk | Likely pathogenic | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS386833443 | Health Risk | Likely pathogenic | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS74315443 | Health Risk | Likely pathogenic | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS763450239 | Health Risk | Likely pathogenic | Inborn genetic diseases, Inborn genetic diseases |
| RS121909346 | Health Risk | Pathogenic | Unverricht-Lundborg syndrome, Unverricht-Lundborg syndrome |
| RS1257171692 | Health Risk | Pathogenic | Progressive myoclonic epilepsy, Progressive myoclonic epilepsy |
| RS147484110 | Health Risk | Pathogenic | Unverricht-Lundborg syndrome, Inborn genetic diseases, Progressive myoclonic epilepsy |
| RS1601855887 | Health Risk | Pathogenic | Progressive myoclonic epilepsy, Progressive myoclonic epilepsy |
| RS2517171405 | Health Risk | Pathogenic | Progressive myoclonic epilepsy, Progressive myoclonic epilepsy |
| RS74315442 | Health Risk | Pathogenic | Unverricht-Lundborg syndrome, 8 conditions, Self-limited epilepsy with centrotemporal spikes |
| RS1569006250 | Health Risk | Pathogenic/Likely pathogenic | Progressive myoclonic epilepsy, Unverricht-Lundborg syndrome, Progressive myoclonic epilepsy |
| RS545986367 | Health Risk | Pathogenic/Likely pathogenic | Unverricht-Lundborg syndrome, Inborn genetic diseases, Progressive myoclonic epilepsy |
| RS796943858 | Health Risk | Pathogenic/Likely pathogenic | Unverricht-Lundborg syndrome, Inborn genetic diseases, Progressive myoclonic epilepsy |