COL1A2 Chromosome 7

Collagen type I alpha 2 chain
581 variants 581 Health Risk

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What This Gene Does
This gene encodes the pro-alpha2 chain of type I collagen whose triple helix comprises two alpha1 chains and one alpha2 chain. Type I is a fibril-forming collagen found in most connective tissues and is abundant in bone, cornea, dermis and tendon. Mutations in this gene are associated with osteogenesis imperfecta types I-IV, Ehlers-Danlos syndrome type VIIB, recessive Ehlers-Danlos syndrome Classical type, idiopathic osteoporosis, and atypical Marfan syndrome. Symptoms associated with mutations in this gene, however, tend to be less severe than mutations in the gene for the alpha1 chain of type I collagen (COL1A1) reflecting the different role of alpha2 chains in matrix integrity. Three transcripts, resulting from the use of alternate polyadenylation signals, have been identified for this gene. [provided by R. Dalgleish, Feb 2008]
Gene Info
Gene Group
Fibrillar collagens
Locus Type
gene with protein product
Location
7q21.3
Ensembl
ENSG00000164692
Associated Conditions (42)
Osteogenesis imperfecta type I
Ehlers-Danlos syndrome
classic type
1
COL1A2-related disorder
Cardiovascular phenotype
Osteogenesis imperfecta
arthrochalasia type
2
perinatal lethal
Connective tissue disorder
cardiac valvular type
Intellectual disability
6 conditions
7 conditions
Predisposition to dissection
Osteogenesis imperfecta type III
Combined osteogenesis imperfecta and Ehlers-Danlos syndrome 2
Osteogenesis imperfecta with normal sclerae
dominant form
+22 more conditions
Key Variants
RS1017077909
Conflicting classifications of pathogenicity
Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
Health Risk
RS1021622151
Conflicting classifications of pathogenicity
Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
Health Risk
RS1064793527
Conflicting classifications of pathogenicity
Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
Health Risk
RS1064797337
Conflicting classifications of pathogenicity
Ehlers-Danlos syndrome, classic type, 1
Health Risk
RS114322680
Conflicting classifications of pathogenicity
Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
Health Risk
RS121912908
Conflicting classifications of pathogenicity
Osteogenesis imperfecta, perinatal lethal, Cardiovascular phenotype
Health Risk
RS1226079110
Conflicting classifications of pathogenicity
Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
Health Risk
RS1228519738
Conflicting classifications of pathogenicity
Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
Health Risk
RS1288784071
Conflicting classifications of pathogenicity
Ehlers-Danlos syndrome, Ehlers-Danlos syndrome
Health Risk
RS1292046736
Conflicting classifications of pathogenicity
Connective tissue disorder, Ehlers-Danlos syndrome, classic type
Health Risk
RS138357977
Conflicting classifications of pathogenicity
Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
Health Risk
RS139446305
Conflicting classifications of pathogenicity
Ehlers-Danlos syndrome, arthrochalasia type, 2
Health Risk
All Variants (581)
RSID Category Clinical Significance Conditions
RS1017077909 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS1021622151 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS1064793527 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS1064797337 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS114322680 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS121912908 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, perinatal lethal, Cardiovascular phenotype
RS1226079110 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS1228519738 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS1288784071 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, Ehlers-Danlos syndrome
RS1292046736 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Ehlers-Danlos syndrome, classic type
RS138357977 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS139446305 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, arthrochalasia type, 2
RS1394933873 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, arthrochalasia type, 2
RS139851311 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS141088934 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, arthrochalasia type, 2
RS141516754 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS142352627 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS143220941 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS144797861 Health Risk Conflicting classifications of pathogenicity 6 conditions, Osteogenesis imperfecta, Ehlers-Danlos syndrome
RS145355907 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Predisposition to dissection, Osteogenesis imperfecta
RS145693444 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS1462108134 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS147058179 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS148063325 Health Risk Conflicting classifications of pathogenicity Cardiovascular phenotype, Cardiovascular phenotype
RS148362963 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS149858889 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS150124840 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS150670521 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Osteogenesis imperfecta, Ehlers-Danlos syndrome
RS150867327 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS151256720 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS1584320246 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type III, Osteogenesis imperfecta type I, Ehlers-Danlos syndrome
RS1584322496 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type III, Osteogenesis imperfecta, Osteogenesis imperfecta type III
RS1584325529 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type III, Osteogenesis imperfecta type I, Ehlers-Danlos syndrome
RS189374343 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, arthrochalasia type, 2
RS189557655 Health Risk Conflicting classifications of pathogenicity Connective tissue disorder, Osteogenesis imperfecta type I, Ehlers-Danlos syndrome
RS193229878 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS193922159 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS193922165 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Osteogenesis imperfecta type I, Ehlers-Danlos syndrome
RS199580542 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS199732595 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS200331961 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS200333208 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, arthrochalasia type, 2
RS200357942 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS201052196 Health Risk Conflicting classifications of pathogenicity Cardiovascular phenotype, Cardiovascular phenotype
RS202068380 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta, Ehlers-Danlos syndrome, arthrochalasia type
RS2115888140 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS2115916781 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
RS2115967180 Health Risk Conflicting classifications of pathogenicity Osteogenesis imperfecta type I, Ehlers-Danlos syndrome, classic type
RS2484692020 Health Risk Conflicting classifications of pathogenicity Cardiovascular phenotype, Cardiovascular phenotype
RS2484705116 Health Risk Conflicting classifications of pathogenicity Ehlers-Danlos syndrome, classic type, 1
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