CLDN1 Chromosome 3
Claudin 1
Upload your DNA to see your personal genotypes for variants in CLDN1.
What This Gene Does
Tight junctions represent one mode of cell-to-cell adhesion in epithelial or endothelial cell sheets, forming continuous seals around cells and serving as a physical barrier to prevent solutes and water from passing freely through the paracellular space. These junctions are comprised of sets of continuous networking strands in the outwardly facing cytoplasmic leaflet, with complementary grooves in the inwardly facing extracytoplasmic leaflet. The protein encoded by this gene, a member of the claudin family, is an integral membrane protein and a component of tight junction strands. Loss of function mutations result in neonatal ichthyosis-sclerosing cholangitis syndrome. [provided by RefSeq, Jul 2008]
Gene Info
Gene Group
Claudins
Locus Type
gene with protein product
Location
3q28
Ensembl
ENSG00000163347
Associated Conditions (3)
CLDN1-related disorder
Inborn genetic diseases
Neonatal ichthyosis-sclerosing cholangitis syndrome
Key Variants
RS145197251
Conflicting classifications of pathogenicity
CLDN1-related disorder, CLDN1-related disorder
Health Risk
RS200926144
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS373516096
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS377184401
Conflicting classifications of pathogenicity
Health Risk
RS1402621591
Likely pathogenic
Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome
Health Risk
RS1716943798
Pathogenic
Health Risk
RS773766654
Pathogenic
Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome
Health Risk
RS864309516
Pathogenic
Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome
Health Risk
RS864309517
Pathogenic
Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome
Health Risk
RS752054405
Pathogenic/Likely pathogenic
Health Risk
All Variants (10)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS145197251 | Health Risk | Conflicting classifications of pathogenicity | CLDN1-related disorder, CLDN1-related disorder |
| RS200926144 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS373516096 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS377184401 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS1402621591 | Health Risk | Likely pathogenic | Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome |
| RS1716943798 | Health Risk | Pathogenic | — |
| RS773766654 | Health Risk | Pathogenic | Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome |
| RS864309516 | Health Risk | Pathogenic | Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome |
| RS864309517 | Health Risk | Pathogenic | Neonatal ichthyosis-sclerosing cholangitis syndrome, Neonatal ichthyosis-sclerosing cholangitis syndrome |
| RS752054405 | Health Risk | Pathogenic/Likely pathogenic | — |