CD40 Chromosome 20

CD40 molecule
22 variants 22 Health Risk

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What This Gene Does
This gene is a member of the TNF-receptor superfamily. The encoded protein is a receptor on antigen-presenting cells of the immune system and is essential for mediating a broad variety of immune and inflammatory responses including T cell-dependent immunoglobulin class switching, memory B cell development, and germinal center formation. AT-hook transcription factor AKNA is reported to coordinately regulate the expression of this receptor and its ligand, which may be important for homotypic cell interactions. Adaptor protein TNFR2 interacts with this receptor and serves as a mediator of the signal transduction. The interaction of this receptor and its ligand is found to be necessary for amyloid-beta-induced microglial activation, and thus is thought to be an early event in Alzheimer disease pathogenesis. Mutations affecting this gene are the cause of autosomal recessive hyper-IgM immunodeficiency type 3 (HIGM3). Multiple alternatively spliced transcript variants of this gene encoding distinct isoforms have been reported. [provided by RefSeq, Nov 2014]
Gene Info
Gene Group
"CD molecules|Tumor necrosis factor receptor superfamily"
Locus Type
gene with protein product
Location
20q13.12
Ensembl
ENSG00000101017
Associated Conditions (2)
Hyper-IgM syndrome type 3
Hyper-IgM syndrome type 1
Key Variants
All Variants (22)
RSID Category Clinical Significance Conditions
RS2515708347 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS376780996 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS745435992 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS745496687 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS763263083 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS771363187 Health Risk Conflicting classifications of pathogenicity
RS774195387 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 1, Hyper-IgM syndrome type 3
RS775430615 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS776893342 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS886056717 Health Risk Conflicting classifications of pathogenicity Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS1047077710 Health Risk Likely pathogenic
RS1194453106 Health Risk Likely pathogenic
RS1600658150 Health Risk Likely pathogenic
RS2085475059 Health Risk Likely pathogenic
RS2515729824 Health Risk Likely pathogenic
RS1211645093 Health Risk Pathogenic
RS1460849632 Health Risk Pathogenic
RS1568905451 Health Risk Pathogenic Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS1568906348 Health Risk Pathogenic Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS2145595063 Health Risk Pathogenic Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
RS2515708304 Health Risk Pathogenic
RS28931586 Health Risk Pathogenic Hyper-IgM syndrome type 3, Hyper-IgM syndrome type 3
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