CD19 Chromosome 16

CD19 molecule
31 variants 31 Health Risk

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What This Gene Does
This gene encodes a member of the immunoglobulin gene superfamily. Expression of this cell surface protein is restricted to B cell lymphocytes. This protein is a reliable marker for pre-B cells but its expression diminishes during terminal B cell differentiation in antibody secreting plasma cells. The protein has two N-terminal extracellular Ig-like domains separated by a non-Ig-like domain, a hydrophobic transmembrane domain, and a large C-terminal cytoplasmic domain. This protein forms a complex with several membrane proteins including complement receptor type 2 (CD21) and tetraspanin (CD81) and this complex reduces the threshold for antigen-initiated B cell activation. Activation of this B-cell antigen receptor complex activates the phosphatidylinositol 3-kinase signalling pathway and the subsequent release of intracellular stores of calcium ions. This protein is a target of chimeric antigen receptor (CAR) T-cells used in the treatment of lymphoblastic leukemia. Mutations in this gene are associated with the disease common variable immunodeficiency 3 (CVID3) which results in a failure of B-cell differentiation and impaired secretion of immunoglobulins. CVID3 is characterized by hypogammaglobulinemia, an inability to mount an antibody response to antigen, and recurrent bacterial infections. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2020]
Gene Info
Gene Group
"CD molecules|Immunoglobulin like domain containing|Minor histocompatibility antigens"
Locus Type
gene with protein product
Location
16p11.2
Ensembl
ENSG00000177455
Associated Conditions (6)
Inborn genetic diseases
Immunodeficiency
common variable
3
CD19-related disorder
Inherited Immunodeficiency Diseases
Key Variants
All Variants (31)
RSID Category Clinical Significance Conditions
RS1159832284 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS140445039 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS142818579 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS146795664 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS148808609 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS199570434 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS199665700 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS200428347 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS200748731 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS370534110 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS371868433 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS372929312 Health Risk Conflicting classifications of pathogenicity
RS376505803 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS556457823 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS573154781 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS747855991 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS769960273 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS776903049 Health Risk Conflicting classifications of pathogenicity Immunodeficiency, common variable, 3
RS1064794850 Health Risk Likely pathogenic
RS1596712783 Health Risk Likely pathogenic Inherited Immunodeficiency Diseases, Inherited Immunodeficiency Diseases
RS1596718225 Health Risk Likely pathogenic Immunodeficiency, common variable, 3
RS2506477480 Health Risk Likely pathogenic
RS758555433 Health Risk Likely pathogenic Inherited Immunodeficiency Diseases, Inherited Immunodeficiency Diseases
RS1250118764 Health Risk Pathogenic
RS1393707607 Health Risk Pathogenic Immunodeficiency, common variable, 3
RS1567506566 Health Risk Pathogenic Immunodeficiency, common variable, 3
RS1964759975 Health Risk Pathogenic
RS2152228184 Health Risk Pathogenic
RS2152230798 Health Risk Pathogenic Immunodeficiency, common variable, 3
RS886037920 Health Risk Pathogenic Immunodeficiency, common variable, 3
RS886037921 Health Risk Pathogenic Immunodeficiency, common variable, 3
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