CD19 Chromosome 16
CD19 molecule
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What This Gene Does
This gene encodes a member of the immunoglobulin gene superfamily. Expression of this cell surface protein is restricted to B cell lymphocytes. This protein is a reliable marker for pre-B cells but its expression diminishes during terminal B cell differentiation in antibody secreting plasma cells. The protein has two N-terminal extracellular Ig-like domains separated by a non-Ig-like domain, a hydrophobic transmembrane domain, and a large C-terminal cytoplasmic domain. This protein forms a complex with several membrane proteins including complement receptor type 2 (CD21) and tetraspanin (CD81) and this complex reduces the threshold for antigen-initiated B cell activation. Activation of this B-cell antigen receptor complex activates the phosphatidylinositol 3-kinase signalling pathway and the subsequent release of intracellular stores of calcium ions. This protein is a target of chimeric antigen receptor (CAR) T-cells used in the treatment of lymphoblastic leukemia. Mutations in this gene are associated with the disease common variable immunodeficiency 3 (CVID3) which results in a failure of B-cell differentiation and impaired secretion of immunoglobulins. CVID3 is characterized by hypogammaglobulinemia, an inability to mount an antibody response to antigen, and recurrent bacterial infections. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2020]
Gene Info
Gene Group
"CD molecules|Immunoglobulin like domain containing|Minor histocompatibility antigens"
Locus Type
gene with protein product
Location
16p11.2
Ensembl
ENSG00000177455
Associated Conditions (6)
Inborn genetic diseases
Immunodeficiency
common variable
3
CD19-related disorder
Inherited Immunodeficiency Diseases
Key Variants
RS1159832284
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS140445039
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS142818579
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS146795664
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS148808609
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS199570434
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS199665700
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS200428347
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS200748731
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS370534110
Conflicting classifications of pathogenicity
Inborn genetic diseases, Inborn genetic diseases
Health Risk
RS371868433
Conflicting classifications of pathogenicity
Immunodeficiency, common variable, 3
Health Risk
RS372929312
Conflicting classifications of pathogenicity
Health Risk
All Variants (31)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS1159832284 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS140445039 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS142818579 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS146795664 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS148808609 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS199570434 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS199665700 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS200428347 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS200748731 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS370534110 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS371868433 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS372929312 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS376505803 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS556457823 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS573154781 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS747855991 | Health Risk | Conflicting classifications of pathogenicity | Inborn genetic diseases, Inborn genetic diseases |
| RS769960273 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS776903049 | Health Risk | Conflicting classifications of pathogenicity | Immunodeficiency, common variable, 3 |
| RS1064794850 | Health Risk | Likely pathogenic | — |
| RS1596712783 | Health Risk | Likely pathogenic | Inherited Immunodeficiency Diseases, Inherited Immunodeficiency Diseases |
| RS1596718225 | Health Risk | Likely pathogenic | Immunodeficiency, common variable, 3 |
| RS2506477480 | Health Risk | Likely pathogenic | — |
| RS758555433 | Health Risk | Likely pathogenic | Inherited Immunodeficiency Diseases, Inherited Immunodeficiency Diseases |
| RS1250118764 | Health Risk | Pathogenic | — |
| RS1393707607 | Health Risk | Pathogenic | Immunodeficiency, common variable, 3 |
| RS1567506566 | Health Risk | Pathogenic | Immunodeficiency, common variable, 3 |
| RS1964759975 | Health Risk | Pathogenic | — |
| RS2152228184 | Health Risk | Pathogenic | — |
| RS2152230798 | Health Risk | Pathogenic | Immunodeficiency, common variable, 3 |
| RS886037920 | Health Risk | Pathogenic | Immunodeficiency, common variable, 3 |
| RS886037921 | Health Risk | Pathogenic | Immunodeficiency, common variable, 3 |