C4B Chromosome 6
Complement C4B (Chido/Rodgers blood group)
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What This Gene Does
This gene encodes the basic form of complement factor 4, and together with the C4A gene, is part of the classical activation pathway. The protein is expressed as a single chain precursor which is proteolytically cleaved into a trimer of alpha, beta, and gamma chains prior to secretion. The trimer provides a surface for interaction between the antigen-antibody complex and other complement components. The alpha chain may be cleaved to release C4 anaphylatoxin, a mediator of local inflammation. Deficiency of this protein is associated with systemic lupus erythematosus. This gene localizes to the major histocompatibility complex (MHC) class III region on chromosome 6. Varying haplotypes of this gene cluster exist, such that individuals may have 1, 2, or 3 copies of this gene. In addition, this gene exists as a long form and a short form due to the presence or absence of a 6.4 kb endogenous HERV-K retrovirus in intron 9. [provided by RefSeq, May 2020]
Gene Info
Gene Group
"Blood group antigens|C3 and PZP like, alpha-2-macroglobulin domain containing|Complement system activation components"
Locus Type
gene with protein product
Location
6p21.33
Ensembl
ENSG00000224389
Associated Conditions (1)
Complement component 4b deficiency
Key Variants
RS139889867
Conflicting classifications of pathogenicity
Complement component 4b deficiency, Complement component 4b deficiency
Health Risk
RS374713901
Conflicting classifications of pathogenicity
Health Risk
RS781626894
Conflicting classifications of pathogenicity
Health Risk
RS771378213
Likely pathogenic
Complement component 4b deficiency, Complement component 4b deficiency
Health Risk
All Variants (4)
| RSID | Category | Clinical Significance | Conditions |
|---|---|---|---|
| RS139889867 | Health Risk | Conflicting classifications of pathogenicity | Complement component 4b deficiency, Complement component 4b deficiency |
| RS374713901 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS781626894 | Health Risk | Conflicting classifications of pathogenicity | — |
| RS771378213 | Health Risk | Likely pathogenic | Complement component 4b deficiency, Complement component 4b deficiency |