B4GALT1 Chromosome 9

Beta-1,4-galactosyltransferase 1
7 variants 7 Health Risk

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What This Gene Does
This gene is one of seven beta-1,4-galactosyltransferase (beta4GalT) genes. They encode type II membrane-bound glycoproteins that appear to have exclusive specificity for the donor substrate UDP-galactose; all transfer galactose in a beta1,4 linkage to similar acceptor sugars: GlcNAc, Glc, and Xyl. Each beta4GalT has a distinct function in the biosynthesis of different glycoconjugates and saccharide structures. As type II membrane proteins, they have an N-terminal hydrophobic signal sequence that directs the protein to the Golgi apparatus and which then remains uncleaved to function as a transmembrane anchor. By sequence similarity, the beta4GalTs form four groups: beta4GalT1 and beta4GalT2, beta4GalT3 and beta4GalT4, beta4GalT5 and beta4GalT6, and beta4GalT7. This gene is unique among the beta4GalT genes because it encodes an enzyme that participates both in glycoconjugate and lactose biosynthesis. For the first activity, the enzyme adds galactose to N-acetylglucosamine residues that are either monosaccharides or the nonreducing ends of glycoprotein carbohydrate chains. The second activity is restricted to lactating mammary tissues where the enzyme forms a heterodimer with alpha-lactalbumin to catalyze UDP-galactose + D-glucose <=> UDP + lactose. The two enzymatic forms result from alternate transcription initiation sites and post-translational processing. Two transcripts, which differ only at the 5' end, with approximate lengths of 4.1 kb and 3.9 kb encode the same protein. The longer transcript encodes the type II membrane-bound, trans-Golgi resident protein involved in glycoconjugate biosynthesis. The shorter transcript encodes a protein which is cleaved to form the soluble lactose synthase. [provided by RefSeq, Jul 2008]
Gene Info
Gene Group
Beta 4-glycosyltransferases
Locus Type
gene with protein product
Location
9p21.1
Ensembl
ENSG00000086062
Associated Conditions (3)
B4GALT1-congenital disorder of glycosylation
Inborn genetic diseases
Combined low LDL and fibrinogen
Key Variants
All Variants (7)
RSID Category Clinical Significance Conditions
RS111399879 Health Risk Conflicting classifications of pathogenicity
RS149181384 Health Risk Conflicting classifications of pathogenicity B4GALT1-congenital disorder of glycosylation, B4GALT1-congenital disorder of glycosylation
RS182359666 Health Risk Conflicting classifications of pathogenicity
RS940141048 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS1564035076 Health Risk Pathogenic B4GALT1-congenital disorder of glycosylation, B4GALT1-congenital disorder of glycosylation
RS1840249855 Health Risk Pathogenic B4GALT1-congenital disorder of glycosylation, B4GALT1-congenital disorder of glycosylation
RS551564683 Health Risk Pathogenic Combined low LDL and fibrinogen, Combined low LDL and fibrinogen
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