ALX4 Chromosome 11

ALX homeobox 4
26 variants 26 Health Risk

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What This Gene Does
This gene encodes a paired-like homeodomain transcription factor expressed in the mesenchyme of developing bones, limbs, hair, teeth, and mammary tissue. Mutations in this gene cause parietal foramina 2 (PFM2); an autosomal dominant disease characterized by deficient ossification of the parietal bones. Mutations in this gene also cause a form of frontonasal dysplasia with alopecia and hypogonadism; suggesting a role for this gene in craniofacial development, mesenchymal-epithelial communication, and hair follicle development. Deletion of a segment of chromosome 11 containing this gene, del(11)(p11p12), causes Potocki-Shaffer syndrome (PSS); a syndrome characterized by craniofacial anomalies, cognitive disability, multiple exostoses, and genital abnormalities in males. In mouse, this gene has been shown to use dual translation initiation sites located 16 codons apart. [provided by RefSeq, Oct 2009]
Gene Info
Gene Group
PRD class homeoboxes and pseudogenes
Locus Type
gene with protein product
Location
11p11.2
Ensembl
ENSG00000052850
Associated Conditions (6)
Inborn genetic diseases
Parietal foramina 2
Frontonasal dysplasia with alopecia and genital anomaly
See cases
Craniosynostosis 5
susceptibility to
Key Variants
All Variants (26)
RSID Category Clinical Significance Conditions
RS1167159867 Health Risk Conflicting classifications of pathogenicity
RS144961504 Health Risk Conflicting classifications of pathogenicity Inborn genetic diseases, Inborn genetic diseases
RS145166164 Health Risk Conflicting classifications of pathogenicity Parietal foramina 2, Inborn genetic diseases, Parietal foramina 2
RS149897209 Health Risk Conflicting classifications of pathogenicity Parietal foramina 2, Parietal foramina 2
RS372830230 Health Risk Conflicting classifications of pathogenicity Parietal foramina 2, Parietal foramina 2
RS374726657 Health Risk Conflicting classifications of pathogenicity Frontonasal dysplasia with alopecia and genital anomaly, Frontonasal dysplasia with alopecia and genital anomaly
RS1085307637 Health Risk Likely pathogenic
RS1403155983 Health Risk Likely pathogenic See cases, See cases
RS746479735 Health Risk Likely pathogenic Parietal foramina 2, Parietal foramina 2
RS104894191 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS104894192 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS104894193 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS104894196 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS104894197 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS1175384200 Health Risk Pathogenic
RS267606653 Health Risk Pathogenic Frontonasal dysplasia with alopecia and genital anomaly, Inborn genetic diseases, Frontonasal dysplasia with alopecia and genital anomaly
RS387906325 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS587776614 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS587777700 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS587777701 Health Risk Pathogenic Frontonasal dysplasia with alopecia and genital anomaly, Frontonasal dysplasia with alopecia and genital anomaly
RS587777702 Health Risk Pathogenic Parietal foramina 2, Parietal foramina 2
RS869320717 Health Risk Pathogenic Frontonasal dysplasia with alopecia and genital anomaly, Frontonasal dysplasia with alopecia and genital anomaly
RS876657391 Health Risk Pathogenic Frontonasal dysplasia with alopecia and genital anomaly, Frontonasal dysplasia with alopecia and genital anomaly
RS1064795941 Health Risk Pathogenic/Likely pathogenic
RS281865153 Health Risk risk factor Craniosynostosis 5, susceptibility to, Craniosynostosis 5
RS281865154 Health Risk risk factor Craniosynostosis 5, susceptibility to, Craniosynostosis 5
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